Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01098 ATGGCAGAGGAAAAACTATTCCGGGTAGGGTACGCTTTGTTGCTAAAGAAGCAAAGCAGCTTCATCCGAGATTCGCTAGTGAATCTCGCAAGATCCCGCGGGATAGACCTGGTCCGGATCGACCCGAACCGGAGCCTAAAGGATCAAGGTCCATTTGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAGGAATCAACTGAACGAGTTTACCGCGAATTATCCGAATGCCGTCGTTCTTGATTCTCCGGAATCGATCGAGAGGCTCCACAATCGGATTTCGATGCTACAGGTCGTGTCGGAGTTGAAAATCGACGACCGGACCGAGACGGTTGGGATTCCGAAGCAGATTGTGATAAACGACAAGGCGAAGCTGTTCGACAGGCGGATCTGGAAGGCGTTGAAGTCTCCGGTGATCGCAAAACCTCTCGTGGCCGACGGCAGCGCGAAGTCGCACAAAATGGCGCTGGTTTACAACCACGAAGGTTTGAATTCTCTGAAGCCTCCTGTGGTGGTGCAGGAGTTCGTGAACCACGGTGGCGTGATCTTCAAGGTGTACGTGGTCGGGGAGCGCGTGAGGTGCGTGAAGCGGAAGTCGCTGCCGGACGTGGAAGAGGAGGAGTTGATGAAGGTTTCGGAGGATTTGTGGGCGTTTTCGCAGTTTTCAAATTTGGCAAGCGATGAAAGAATCGACGACAAATATTACAAGATGATGCATTTGGATGATGCTGAGATGCCTCCTCTGAGCTTCGTTACTCAGATAGCTCGAGAGCTGAGGCGTGTGATGAAGCTAAACCTGTTTAATTTCGATGTTATTAGGGATTCTCGACGCAAAAATCGTTATCTTATTGTTGATATCAATTACTTCCCAGGGTATGCGAAAATGCCTGGTTATGAGACTGTTTTTACTGAGTTTTTGTGTGATGTGTTGTGCAAGAAACGGCGAGGGGGTGAGACTGAGGAGTGTGACAAAGATGCAACGAGGATTGTGATCAATACTTGTAGCGGGGATGGGGAAGACAAAGAGGGTTCTGTATATGTATGA 1047 0.4967 MAEEKLFRVGYALLLKKQSSFIRDSLVNLARSRGIDLVRIDPNRSLKDQGPFDCVLHKLYGDDWRNQLNEFTANYPNAVVLDSPESIERLHNRISMLQVVSELKIDDRTETVGIPKQIVINDKAKLFDRRIWKALKSPVIAKPLVADGSAKSHKMALVYNHEGLNSLKPPVVVQEFVNHGGVIFKVYVVGERVRCVKRKSLPDVEEEELMKVSEDLWAFSQFSNLASDERIDDKYYKMMHLDDAEMPPLSFVTQIARELRRVMKLNLFNFDVIRDSRRKNRYLIVDINYFPGYAKMPGYETVFTEFLCDVLCKKRRGGETEECDKDATRIVINTCSGDGEDKEGSVYV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01098 348 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 308 IPR040464 -
Vian10g01098 348 FunFam Inositol-tetrakisphosphate 1-kinase 83 292 - -
Vian10g01098 348 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 314 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vian10g01098 348 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 82 294 - -
Vian10g01098 348 PIRSF ITPK 1 323 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vian10g01098 348 Gene3D - 84 292 - -
Vian10g01098 348 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 8 87 IPR041429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01098 Vian-Chr10 13010863 13011909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01098 K00913 - gmx:100794373 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01098 10 13010863 13011909 Vian10g01098 10 13010863 13011909 ECH
Vian10g01098 10 13010863 13011909 Vian1g02067 1 24940154 24944013 PCT