Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01936 ATGGGAATTTTCCCAAACACGTTCTTCACCAAAGCCCGCAACATCATAGGCTTTGGGCTCGCTTCCACCGCTGCCGCAGCCACAATCGCGGCCTCCAATTCCAACGTCTCTTCTTCTTCTTCTTCTTCGTCCTCTTCTTCTTTTACTTCATCTTCTTCTTCTGCTTCTTCTTCTCCTTCATCCACCGCCTCTTCCGCCTCTTCGTCCATTGCCGGCGATACTTCTTCCTCCTCCGATGGCGAAATCGTCCCCCGGAAAATACTGAAAACGAAGCTTTGCATCATCGGAAGTGGGCCGGCGGCGCACACAGCCGCCATTTACGCTGCTCGAGCGGAGCTGAAGCCGGTCCTCTTCGAAGGATGGATGGCGAACGGCGTCGCTCCTGGCGGCCAGCTAACCACCACCACCGACGTTGAGAACTTTCCGGGATTTCCGGCTGGCATCCTCGGCGCCGAGCTCATGGACCGCTGTCGCGAGCAGTCGCAGCGCTTCGGTGCCGAGATCGTCACGGAGACCGCGACGACTGTGGACTTCTCCGAACGGCCGCTTAGGGTTTTCACCGACTCCACCACCGTGGAAGCTGAATCCGTCATCATCGCCACAGGCGCAGTTGCTAAGCGGCTGAATTTCGATGGCGCGGGTGACGGACCCGACGGGTTCTGGAACCGTGGGATATCGGCGTGCGCCGTGTGTGACGGTGCCGCGCCGATATTCCGGGCCAGACCTCTGGCGGTTATCGGTGGCGGAGATTCTGCTATGGAGGAAGCTAGCTTCCTCACCAAGTTTGGTTCCAAGGTGTATGTAATTCATAGAAGGGACAAGTTTAAGGCTTCTAAGATCATGCAGGGGAAGCTGATGAATAATCCCAAAGTTGAGGTGTTATGGAATTCAATAGTTGTTGGGGCTTATGGGGATAATAAGGGTAGGGTTCTTGGTGGGGTTAAGGTGAAGAACGTGGTGACTGGGGTTGTGTCTGATTTGAAAGTTTCTGGTTTGTTCTTTGCAATTGGGCATGAGCCTGCCACGAAATTCTTGGATGGTCAACTTGAATTAGACTCTGATGGGTACATTGTGACCAAACCTGGCACCACAAAGACTAGTGTTGATGGGGTTTTTGCTGCCGGTGATGTGCAGGATAAAAAGTATAGGCAAGCTATTACTGCAGCTGGAACAGGGTGTATGGCAGCGTTGGATGCAGAACATTTCTTGCAAGAGATAGGTTTGCAGGATGGTAGGAGAGTTTAA 1245 0.5333 MGIFPNTFFTKARNIIGFGLASTAAAATIAASNSNVSSSSSSSSSSSFTSSSSSASSSPSSTASSASSSIAGDTSSSSDGEIVPRKILKTKLCIIGSGPAAHTAAIYAARAELKPVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGAELMDRCREQSQRFGAEIVTETATTVDFSERPLRVFTDSTTVEAESVIIATGAVAKRLNFDGAGDGPDGFWNRGISACAVCDGAAPIFRARPLAVIGGGDSAMEEASFLTKFGSKVYVIHRRDKFKASKIMQGKLMNNPKVEVLWNSIVVGAYGDNKGRVLGGVKVKNVVTGVVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHFLQEIGLQDGRRV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01936 414 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 90 405 - -
Vian1g01936 414 SUPERFAMILY FAD/NAD(P)-binding domain 88 402 IPR036188 -
Vian1g01936 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 356 378 - -
Vian1g01936 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 242 260 - -
Vian1g01936 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Vian1g01936 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 329 345 - -
Vian1g01936 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 92 111 - -
Vian1g01936 414 Gene3D - 210 341 IPR036188 -
Vian1g01936 414 Pfam Pyridine nucleotide-disulphide oxidoreductase 91 391 IPR023753 GO:0016491
Vian1g01936 414 MobiDBLite consensus disorder prediction 34 80 - -
Vian1g01936 414 Gene3D - 94 402 IPR036188 -
Vian1g01936 414 FunFam Thioredoxin reductase 215 341 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 331 352 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 290 306 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 129 144 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 366 384 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 221 233 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 195 203 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 91 113 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 150 160 - -
Vian1g01936 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 238 262 - -
Vian1g01936 414 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 228 250 IPR008255 GO:0016491
Vian1g01936 414 NCBIfam thioredoxin-disulfide reductase 91 403 IPR005982 GO:0004791|GO:0005737|GO:0019430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01936 Vian-Chr1 23070069 23072259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01936 K00384 - gmx:100794363 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00915 10 9433946 9438045 Vian1g01936 1 23070069 23072259 PCT