Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00915 ATGGCTGACATTCAGATCCATAAGACCAAACTCTGCATCATCGGAAGCGGTCCCGCCGCCCATACTGCCGCCGTGTACGCCGCCCGCGCTGAACTCAAGCCGATCCTCTTCGAAGGATGGATGGCGAACGACATCGCCCCCGGTGGCCAGCTCACCACCACAACTGACGTTGAGAACTTCCCCGGCTTCCCCGACGGCATACTTGGCGGCGAGCTCATGGAGAACTGCCGGAAGCAGTCGCTGCGCTTCGGTACCGAAATCCACACCGAGACCGTCTCCAAGGTCGATTTCTCGAACCGTCCTTTTAGGGTTTTCACCGATTCCCGCACTGTCGAGGCCGACTCCGTCATCGTTGCCACCGGCGCCGTCGCCAAGCGCCTTCCGTTCACCGGCTCTGGCGACGGCCCTGACGGCTACTGGAATCGCGGGATCTCCGCGTGTGCCGTCTGCGACGGTGCCGCCCCAATTTTCCGGAACAAGCCCCTGGCGGTGATTGGTGGCGGGGACTCGGCCATGGAGGAGGCGACGTTCCTTACTAAGTACGGTTCCGAGGTGTACATAATTCATCGGAGGGACACGTTCAGGGCCTCGAAGATTATGCAGAGCAAGGTGATGAATAATAGCAAGATCAAGGTGATCTGGAACTCGGTGGTGGTTGAAGCCTATGGGGGCGGAGATAACAAGAGGGTGCTTGGGGGACTGAAGGTGAAGAATGTGGTGACTGATGAGGTGTCTGACTTGAAGGTATCTGGTTTGTTTTTCGCAATAGGCCACGAGCCTGCAACCAAGTTCTTGGACGGTCAGCTTGAACTGGATTCTGATGGCTACGTCGTTACCAAGCCTGGGACTACGAAGACCAGTGTTGAGGGAGTGTTTGCTGCTGGTGATGTTCAGGACAAGAAGTATAGGCAAGCTATTACTGCTGCTGGCTCTGGATGCATGGCCGCATTGGATGCAGAACATTACCTGCAAGGTGTTGGTGTTCAACAAGATAAGAGTGATTGA 1005 0.5632 MADIQIHKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMENCRKQSLRFGTEIHTETVSKVDFSNRPFRVFTDSRTVEADSVIVATGAVAKRLPFTGSGDGPDGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKVMNNSKIKVIWNSVVVEAYGGGDNKRVLGGLKVKNVVTDEVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQGVGVQQDKSD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00915 334 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Vian10g00915 334 PRINTS FAD-dependent pyridine nucleotide reductase signature 276 298 - -
Vian10g00915 334 PRINTS FAD-dependent pyridine nucleotide reductase signature 11 30 - -
Vian10g00915 334 PRINTS FAD-dependent pyridine nucleotide reductase signature 113 131 - -
Vian10g00915 334 PRINTS FAD-dependent pyridine nucleotide reductase signature 249 265 - -
Vian10g00915 334 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 8 324 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 209 225 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 140 152 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 114 122 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 251 272 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 157 181 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 286 304 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 10 32 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 48 63 - -
Vian10g00915 334 PRINTS Pyridine nucleotide disulphide reductase class-II signature 69 79 - -
Vian10g00915 334 SUPERFAMILY FAD/NAD(P)-binding domain 7 323 IPR036188 -
Vian10g00915 334 Gene3D - 129 261 IPR036188 -
Vian10g00915 334 FunFam Thioredoxin reductase 133 261 - -
Vian10g00915 334 Pfam Pyridine nucleotide-disulphide oxidoreductase 10 311 IPR023753 GO:0016491
Vian10g00915 334 NCBIfam thioredoxin-disulfide reductase 10 323 IPR005982 GO:0004791|GO:0005737|GO:0019430
Vian10g00915 334 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 147 169 IPR008255 GO:0016491
Vian10g00915 334 Gene3D - 13 322 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00915 Vian-Chr10 9433946 9438045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00915 K00384 - gmx:100790557 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00915 10 9433946 9438045 Vian10g00915 10 9433946 9438045 ECH
Vian10g00915 10 9433946 9438045 Vian1g01936 1 23070069 23072259 PCT