Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01927 ATGGGGTTTTGGGAATTGTTGGAGGTGGCTTCTGCGCCAGTTATTGAAGTCCTACTTATCAGTGCAGTAGGAGTTTTTATGGCAACAGAAAGTTGTAATAATCTTCTTTCACCAGACTTTAGAAAATCCTTGAACAAGGTTGTCTTCATTGCGTTCACTCCTTCACTTATATTTGCCAGTTTTGCCAAGAATGTTTCTCTTGACGAAATGATATTATGGTACCATAGCATCAAAGTTGTGGTACAGTCGGCAAGAGTAAAATTTGGAAGGAATGGTGAGGAAGTTCTTGGTGGTGTCTTCATCTGGACCTATACTTACCAACTAATGCGAAACACATCCTTGAGATATAAAGCATTTGAGGCTGCCGAGATCTTAAAGATGCCCAACAAAGGCCTAGATGCTGATGAAGAAACTGGCTTTCTCAAGCGAAATGCCGGAGACTCAGCAAATCAAATTCTTGTAGACCAATGTGCGTCCACTGTGTCTATGAATAGTGAAACATCTTTATGGCATAGAATGACGGAAACTGTTGGTCATTTCCTGACAGAACTAATGTCACCCCCAACAATTGCTACGTTTTTTGGTTTTCTCTTTGGTGGGGTTGAATGGCTAAGGAATCTAATAATAGGACGCGAAGCTCCACTACGAGTGATCCTAGACTCCATTCAATTACTAGGGGATGGTACAATTCCTTGTATCACTGTTTTGCTTGGAGGCAACCTTACACAAGGCATGCAGTCATCAAGTGTCCAACCATTGGTCGTGATATGTATCATCATAGCTCGACTAGTCTTGCTACCTGCCATTGGATTTTTTGTTGTTAGAGGGGCTGCAAATTTTGGTCTGCTCCCATTGGACCCTTTGTTTCAGTATGTGCTAGTGATTCAGTATGCCTTGCCACCTGCAATGAACATCAGTGAGTGA 924 0.421 MGFWELLEVASAPVIEVLLISAVGVFMATESCNNLLSPDFRKSLNKVVFIAFTPSLIFASFAKNVSLDEMILWYHSIKVVVQSARVKFGRNGEEVLGGVFIWTYTYQLMRNTSLRYKAFEAAEILKMPNKGLDADEETGFLKRNAGDSANQILVDQCASTVSMNSETSLWHRMTETVGHFLTELMSPPTIATFFGFLFGGVEWLRNLIIGREAPLRVILDSIQLLGDGTIPCITVLLGGNLTQGMQSSSVQPLVVICIIIARLVLLPAIGFFVVRGAANFGLLPLDPLFQYVLVIQYALPPAMNISE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01927 307 Pfam Membrane transport protein 11 73 IPR004776 GO:0016020|GO:0055085
Vian1g01927 307 Pfam Membrane transport protein 95 305 IPR004776 GO:0016020|GO:0055085
Vian1g01927 307 PANTHER - 1 81 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01927 Vian-Chr1 22927314 22929875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01927 K24139 - gmx:100785791 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00918 10 9475673 9477206 Vian1g01927 1 22927314 22929875 PCT