Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00918 ATGAGAATTTCAGCAAGTATAGTTCCTAAAGAAGAACATAGAACTAGCTCATTCACACAGGAGGCTTCAGGAGAGATACTAGATTTCCTCTCTGAGGAAGAAGACCCAAAAAATCCTGATAACATGGGTGGTGATAATGATGCATACACCCTATTGCTTTCTTCAAATCAATCCGAGGAGAAAGTGAAGGTATCAATCTCAGCTAAAATCAAAGACCTATCAGGAAAGTTTTTTGGCAACTCCAATTTCAAAGCCGTATTTTCACCAACAACTCTTGGATCGATTGTTGGGTTTATTGTTGGGGTGGTTCCCCTGATACGTAAACTCATGATTGGCAGCGACGCGCCACTTCATGTGATTGAAGACTCTGTTACCATGTTGGGTGAAGCTACAATCCCAGTTATAACTCTTATAATGGGAGCAAACCTCCTTAAAGGCTTGAAGGGAGCAGATACTTCATTCAGTACAATCATTGGAATATTAGTAGTTCGATATATCATGCTTCCAATTTTGGGTATTCTAGTTATTAAAGGAGCAACTCAATTGGGTTTGGTGCAACCGGATCCCTTGTATCAGTTTGTTCTTCTCCTTGAATATGCACTTCCTCCAGCAATGGCTATAGGAACCATTGCCCAGCTGTTTGGAGCAGGTGAAGGTGAATGTTCAGTTATCATGCTATGGACATATGCTTTGGCGTCAGTTGCAGTCACTTTATGGTCAACCTACTTCATGTGGCTTGTGGCTTAA 747 0.4123 MRISASIVPKEEHRTSSFTQEASGEILDFLSEEEDPKNPDNMGGDNDAYTLLLSSNQSEEKVKVSISAKIKDLSGKFFGNSNFKAVFSPTTLGSIVGFIVGVVPLIRKLMIGSDAPLHVIEDSVTMLGEATIPVITLIMGANLLKGLKGADTSFSTIIGILVVRYIMLPILGILVIKGATQLGLVQPDPLYQFVLLLEYALPPAMAIGTIAQLFGAGEGECSVIMLWTYALASVAVTLWSTYFMWLVA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00918 248 Pfam Membrane transport protein 61 239 IPR004776 GO:0016020|GO:0055085
Vian10g00918 248 MobiDBLite consensus disorder prediction 1 18 - -
Vian10g00918 248 PANTHER - 37 247 IPR045033 GO:0080162
Vian10g00918 248 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00918 Vian-Chr10 9475673 9477206 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00918 K24139 - gmx:100785182 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00918 10 9475673 9477206 Vian10g00918 10 9475673 9477206 ECH
Vian10g00918 10 9475673 9477206 Vian1g01927 1 22927314 22929875 PCT