Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01769 ATGGTGAACCTGGTTGCAGCGCAGAGACCATTGCTTCATGGGCTAATGAAGATGGCGGGGATCAGGCCGTACACGGTGGAGATTGAGCCCGGGACCGTGATGAGTTTCTGGGTCCCTTCAGAGACCATAACGAAGCCCAAGAAAAAAGAGGAAAAGCCCAGAATCATAGCGAAGCCCAGCAAGCCCACGGTGGTTCTGGTGCACGGTTTCGCCGGCGAAGGAATCGTGACATGGCAGTTCCAAGTGGGGGCGTTGACGAAGAAGTACGCTGTTTATGTTCCCGATCTTCTGTTCTTCGGAGGGTCCTCCACCGATAAAGCGGACAGGTCGCCAAGGTTTCAAGCGGAGTGTCTGGTGCGGGCCTTAAGGAAACTTGGGGTGGAGAAATGCATAGTGGTTGGGTTCAGTTACGGGGGAATGGTTTCGTTTAAGATGGCTGAGATGTACCCTGAAATGGTTGAAGGAATGGTTATTTCTGGGTCCATTGTCGCCATGTCGAACTCGCTAAGCGCCGCCTCGCTGCAACAGCTTGGTTTCTCTTCTTCTTCGGATCTCTTGATGCCTACCTCTGTTAAGGGTCTTAAGGCCCTCTTATCCGTCGCTGCTCACAAAAAACTCTGGTTTCCTGATCGTTTGCACAAAGATTTTCTTGAGGTGATGTTTACGAATAGAAAGGAACGGGCTGAACTATTGGAGGGCTTAGTAATTAGCAACAGAGATATGGTGGCCACCCCCAAATTTCCACAGAGAATACATCTTTTATGGGGCCAGAACGATCAAATTTTCAAACTGGAGCTTGCACAAAATATGAAAGAAGAACTAGGGGATGGCACAACGTTTGAAAGCATAGAGAAAGCTGGTCACCTTGTTCAGCTGGAGCGACCCTGTGTCTACAATAGATGCCTCAAGAACTTTCTCTCTTCCTTCTTGACCAAAAATCATTAA 945 0.4899 MVNLVAAQRPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPKKKEEKPRIIAKPSKPTVVLVHGFAGEGIVTWQFQVGALTKKYAVYVPDLLFFGGSSTDKADRSPRFQAECLVRALRKLGVEKCIVVGFSYGGMVSFKMAEMYPEMVEGMVISGSIVAMSNSLSAASLQQLGFSSSSDLLMPTSVKGLKALLSVAAHKKLWFPDRLHKDFLEVMFTNRKERAELLEGLVISNRDMVATPKFPQRIHLLWGQNDQIFKLELAQNMKEELGDGTTFESIEKAGHLVQLERPCVYNRCLKNFLSSFLTKNH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01769 314 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Vian1g01769 314 PRINTS Epoxide hydrolase signature 283 305 IPR000639 GO:0003824
Vian1g01769 314 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Vian1g01769 314 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Vian1g01769 314 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Vian1g01769 314 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Vian1g01769 314 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Vian1g01769 314 PRINTS Alpha/beta hydrolase fold signature 251 265 IPR000073 -
Vian1g01769 314 SUPERFAMILY alpha/beta-Hydrolases 58 306 IPR029058 -
Vian1g01769 314 Gene3D alpha/beta hydrolase 17 309 IPR029058 -
Vian1g01769 314 PANTHER SI:DKEY-122A22.2 1 307 - -
Vian1g01769 314 Pfam alpha/beta hydrolase fold 62 177 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01769 Vian-Chr1 20775361 20778523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01769 - - gmx:100816070 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01769 1 20775361 20778523 Vian10g00707 10 6847871 6853868 ECH
Vian1g01769 1 20775361 20778523 Vian1g01769 1 20775361 20778523 ECH
Vian10g00707 10 6847871 6853868 Vian1g01769 1 20775361 20778523 PCT