Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00707 ATGGTTAACGTTGTAACAGCATATGGTTGGTTGTTGCATTGGCTACTGAGGGCGGTGGGGTTGACACCTTATATGGTGGAGATAGAGCCAGGGACGGTTATAAAATTCTGGGGGCCATGCGACGCCGTCTCGAGCGCCAAATGCCTTTCTTCCAAACCAGTGGTGGTTCTCCTGCACGGCTTCTGCGGCGACGGAATCATCAACTGGCAGTGTCAGGTAGCAGCTTTGACGAGAGACTACGCGGTCTATGTTCCGGACCTTCTCTTCTTCGGTGGATCCGTCACCGATAAGGCGGAACGGTCGCCGGAGTTTCAAGCGGAGTGTTTGGCGGCAGGGTTGGGGAAGCTCGGGGTGGAGAAGTGCGTTTTGGTTGGGTTCAGTTATGGAGGGTTTGTGGCGTTGAAAATGGCTGAGATGTACGCTGAGATGGTGGAGGGTGCAGTGGTGTCTGGCGCCGTTGTGGCTATTACGGATTCTGTAGTTTTGAGAGCAGTGGAAGGGATTGGGTATTCGTCGTGTTCGGAGATGTTGTTGCCGGTGTCCGTTGGGGAACTGAAGACCCTTCTTTCCGTTGCTTGTTACAGAAACCTCTCCTTACCCAACCGTTTCTACGCAGACTTCTTACAGCACAATGAATTGCAGGCAATGTACTCAAATAGGAAGGAGCGAGCTGAGCTGTTGGAGGCCTTAGTCATTAGCTACAAAGAGATCAAAATCCCAAAATTTCACCAGCGAATACATCTTCTATGGGGTGAGGATGACAAAATTTTTAAAGTAGAGTTTGCGCAGAAAATGAAAGAGAAGGTGGGAAATAATGCAACATATGAAGGCATAAAGAGTGCGGGTCACCTGGTTCACCTGGAGCGACCCTGGCTCTATAATAAGAGCCTCAAGCAATTTCTTTCCTCTGTTTTTCCATTGCCAGGTGCCAAAAACTGA 939 0.4984 MVNVVTAYGWLLHWLLRAVGLTPYMVEIEPGTVIKFWGPCDAVSSAKCLSSKPVVVLLHGFCGDGIINWQCQVAALTRDYAVYVPDLLFFGGSVTDKAERSPEFQAECLAAGLGKLGVEKCVLVGFSYGGFVALKMAEMYAEMVEGAVVSGAVVAITDSVVLRAVEGIGYSSCSEMLLPVSVGELKTLLSVACYRNLSLPNRFYADFLQHNELQAMYSNRKERAELLEALVISYKEIKIPKFHQRIHLLWGEDDKIFKVEFAQKMKEKVGNNATYEGIKSAGHLVHLERPWLYNKSLKQFLSSVFPLPGAKN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00707 312 Gene3D alpha/beta hydrolase 43 304 IPR029058 -
Vian10g00707 312 PRINTS Alpha/beta hydrolase fold signature 79 94 IPR000073 -
Vian10g00707 312 PRINTS Alpha/beta hydrolase fold signature 123 136 IPR000073 -
Vian10g00707 312 PRINTS Alpha/beta hydrolase fold signature 246 260 IPR000073 -
Vian10g00707 312 Pfam alpha/beta hydrolase fold 53 156 IPR000073 -
Vian10g00707 312 SUPERFAMILY alpha/beta-Hydrolases 51 303 IPR029058 -
Vian10g00707 312 PANTHER SI:DKEY-122A22.2 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00707 Vian-Chr10 6847871 6853868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00707 - - pvu:PHAVU_002G030900g 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01769 1 20775361 20778523 Vian10g00707 10 6847871 6853868 ECH
Vian10g00707 10 6847871 6853868 Vian10g00707 10 6847871 6853868 ECH
Vian10g00707 10 6847871 6853868 Vian1g01769 1 20775361 20778523 PCT