Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01755 ATGGCAGCTTCCACTTCCAATGCCGTTCTTCTCGGAGATGTCTACTTTGACGAAGTCACCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGGACGCGCCGCGCCGCTTTGCGAGCTACCGTCAATCTCACAAGATTGCAACCCTTGAACAGTCTTTTGAACTTCGGGTGCTCCACCTCCAATTCAACTTGGAGGAGTTGGAATCCGAGCTCGCTCCTTGTTGGAACCAAGCGCCCCTCCTTTCCTTGCTGCTCCGCCGATACAGCGCCTCATGTTCAACACCTTTCCTCCTCCACATTTTCACTCGACCAAACAAATTTTGGTCCTGAGAAGTTGAAGTTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTTATTTGCGTAGATGAACAAACAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCAAGAACTCATGTCCCATTCTGTTAGAGCAGTTGAAGAGGAACCAAAAGGTTCTGTTGATCCCGCGAGTGTTTTAGAGAAGGCTCACTCATTTACAAAGGCAAAGGGTTCATCAACAGCTTGTATCATTTCCCTTAGTGATACGGGACTGCATGCCATTAATTTAGGTGACAGTGGGTTCATTGTGATTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTTACGTATCAACTGGAGAGTGGCAATGGATGTGATCTACCCAGCTCTGGTGAGGTATTCAAAATATCTGTTGTGCCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTTGCTGAAGTTGTTTTGAAGGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACAGGAATAGACAGACACCATTTGCTACTGCCGCCCAAGAGGCTGGGTTCCGTTATTATGGTGGGAAGCTTGATGACATAACAGTTATAGTGTCATACATAACTGGCTCAACATATTGA 1080 0.4769 MAASTSNAVLLGDVYFDEVTAKPSGVRFRDRTRRAALRATVNLTRLQPLNSLLNFGCSTSNSTWRSWNPSSLLVGTKRPSFPCCSADTAPHVQHLSSSTFSLDQTNFGPEKLKLFSGSCYLPHPDKEDYGGEDAHFICVDEQTIGVADGVGGWADVGVNAGLFAQELMSHSVRAVEEEPKGSVDPASVLEKAHSFTKAKGSSTACIISLSDTGLHAINLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGCDLPSSGEVFKISVVPGDVVVAGTDGLFDNLYNDEVAEVVLKAVRAGLEPQVTAQKIAALARQRALDRNRQTPFATAAQEAGFRYYGGKLDDITVIVSYITGSTY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01755 359 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Vian1g01755 359 PANTHER PROTEIN PHOSPHATASE 2C 91 355 IPR039123 -
Vian1g01755 359 Gene3D - 126 251 IPR036457 -
Vian1g01755 359 FunFam 5-azacytidine resistance protein azr1 123 248 - -
Vian1g01755 359 Pfam Stage II sporulation protein E (SpoIIE) 143 352 IPR001932 -
Vian1g01755 359 SUPERFAMILY PP2C-like 119 352 IPR036457 -
Vian1g01755 359 SMART PP2C_4 105 352 IPR001932 -
Vian1g01755 359 Gene3D - 257 358 IPR036457 -
Vian1g01755 359 SMART PP2C_SIG_2 128 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01755 Vian-Chr1 20537172 20548227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01755 K17508 - gmx:100784475 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01755 1 20537172 20548227 Vian1g01755 1 20537172 20548227 ECH
Vian1g01755 1 20537172 20548227 Vian10g00677 10 6524238 6526987 ECH
Vian10g00677 10 6524238 6526987 Vian1g01755 1 20537172 20548227 PCT