Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01732 ATGGAGGATGATAATGCAGATAACCACCTTGAGACTTCAGATCGAACAAAGCTGGATACAGGGTACCTCACGGAATGTGGTAAACCAAGGAAAAAACAAACCCCTACAAATGATGTTCAACTTACACTGAAGCAAGAGATTTTACAATTAGAGAAAAGACTACAAGATCAATTTGAGGTCAGATGCACGTTAGAAAAGGCTCTTGGATACAGACCTAAATCCCTTGTTACATCAAATGACAAGATACTGCCCAAGCCAACGTCCCAATTAATTAAAGAGATTGCGGTGTTAGAGTTAGAAGTTGTGTATTTGGAACAATATCTTCTCTCCTTGTATCGTAAAGCATTTGATGAACAATTACCCTCTATAGCTCCATTCACCAAGGGGGGAAAAATAAAGTCTCCTCCAACAGCACCTACAGCAATATTCGTTGAAGTATCTAAGCCTGATCTCTTAACCAAAAGAGGAAGCTCTGCAGTACAATCAATTGATCACGAGCTTGATGCTACGCCAAAGGATTATAGTGTAAATGAACCTCAGACTTTAGGAAAAGAATACAATGTACATCAACCAGAAGGAAAACATTTAGACTCTGGTGTATATCGGTGCCACTCCTCGTTATCCCAGTGTACAGCATTTACAACGAGAGTATCGCCTCCTGCAGCAGATGAATTAACTGAATCTCTGCGTGCTTGTCATTCCCAACCACTGTCCATGATGGAGTATGCCCAAAATGTTGATGCTTCATCAAGAATAATCAGTTTGGCAGAACATCTTGGCACACGAATATCTGATCATATTCCAAATACACCTAATAGGCTTTCTGAGGATATGGTCAAATGCATATCAGCTATATATTGCAAAATCGCAGATCCATCTACGACAAATGCTGGTCTTTCATCTCCCAGTTCATCCTTGTCTACAACTAGTGGCTTTTCTATTGGAGATCAAGGAGACATGTGGAGTCCAGGGTTCAGGAATTCTTCCTTTGATGTGCGGTTAGACAATCCTTTCCATGTGGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACCATGGTTGAGGTATCATGGATTTACCGAGAGAATCAGAAATTGGGTGATACTGAGCAGTTGCTCAAGAATTTCAGATCACTTATTTGTCAGTTAGAAGATGTAGATCCTGGGAAATTAAAACATGAGGAGAAATTAGCTTTCTGGATCAACATACACAACGCTTTGGTGATGCATGCATTTTTGGCTTATGGAATCCCGCAAAACAACGTCAAAAGAGTCCTCCTTTTGTTGAAGGCTGCATATAATGTTGGTGGTCATACAGTCAGTGCAGACACAATACAGAAAGCTATAATCGGGTGCCAGATGCCTCGCCCCGGACAGTGGCTACGCTTGTTCTTTTCTTCAAGGACAAAATTCAAAGCTGGAGATGGACGACAAGCATTTGGAATTGAGCATCCTGAGCCTCTTCTGCACTTTGCTCTCTGTTCAGGAAACCATTCTGATCCAGCGGTACGTGTATATACACCCAAGAGAGTGGTTCAAGAACTAGAAGCTGCAAAGGAAGAATACATTCGGGCCACCTTTGGGGTACGCAAGGACCAGAAAATACTCTTACCTAAGCTTGTGGAGTCATTTTGTAAAGACTCGGGTTTATGCTCTGCTGGTACCCTGGAGATGATCCAAAAGTCTCTACCTGAATCTCTAAGAAAGAGTATTAAAAAATATGACCTTGCAAAATCTAAGAAGAGCATAGAATGGATTCCACACAACTTCACTTTTCGATATCTCATACCCAAGGAGCTGGTAAAATAA 1809 0.4146 MEDDNADNHLETSDRTKLDTGYLTECGKPRKKQTPTNDVQLTLKQEILQLEKRLQDQFEVRCTLEKALGYRPKSLVTSNDKILPKPTSQLIKEIAVLELEVVYLEQYLLSLYRKAFDEQLPSIAPFTKGGKIKSPPTAPTAIFVEVSKPDLLTKRGSSAVQSIDHELDATPKDYSVNEPQTLGKEYNVHQPEGKHLDSGVYRCHSSLSQCTAFTTRVSPPAADELTESLRACHSQPLSMMEYAQNVDASSRIISLAEHLGTRISDHIPNTPNRLSEDMVKCISAIYCKIADPSTTNAGLSSPSSSLSTTSGFSIGDQGDMWSPGFRNSSFDVRLDNPFHVEGLKEFSGPYSTMVEVSWIYRENQKLGDTEQLLKNFRSLICQLEDVDPGKLKHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRVLLLLKAAYNVGGHTVSADTIQKAIIGCQMPRPGQWLRLFFSSRTKFKAGDGRQAFGIEHPEPLLHFALCSGNHSDPAVRVYTPKRVVQELEAAKEEYIRATFGVRKDQKILLPKLVESFCKDSGLCSAGTLEMIQKSLPESLRKSIKKYDLAKSKKSIEWIPHNFTFRYLIPKELVK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01732 602 PANTHER UNCHARACTERIZED 20 600 - -
Vian1g01732 602 Pfam Protein of unknown function, DUF547 390 523 IPR006869 -
Vian1g01732 602 Pfam Leucine-zipper of ternary complex factor MIP1 37 118 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01732 Vian-Chr1 20111383 20115272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01732 - - gmx:100816025 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01732 1 20111383 20115272 Vian1g01732 1 20111383 20115272 ECH
Vian10g00643 10 6103463 6107817 Vian1g01732 1 20111383 20115272 PCT