Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00643 ATGGGCATTGTGCTTCATCTGAGTTCTGACTCGTTAAGTTCCAAGAACTCTGTTTTCGGTGGCTTTCAGTTATGGGGCTTGAAGGGGGTGGAGGAAATAAAATGCTGGGATTGTGATTTACGCCAAGGCACAAACGTTCAAAGAGTCTTCCTGATAAGAAAAAAAATCGAGGAGGATAATCCAGATAATCGCATTCAGGCTTCAGATCGCAAGAAGCTGGACATGGGTTATCTCACGGAATGTGATAAAGCTGGGAAAAACCGAACCCCTACAAATGAAGTTCACAGCACTCTGAAGCAAGAGATTCTACAACTGGAGAGAAGATTACAAGACCAATTTCAGGTCAGAGGCACGTTAGAAAAGGCACTTGGATACAGATCTTCATCTCTCGTTAATTCAAATGAGATGATGATACCCAAGCCAGCCACAGAATTAATTAGGGAAATTGCAGTGTTAGAGTTGGAAGTTGTGTATTTGGAGCAACATCTTCTGTCCTTGTACCGTAAAGCATTTGATCAACAATTGTCTTCGGTATCTCCGACTTCAAAAGATGAAAGTATAAAGTTCCCTTTGACAACACTTAGTGCACGATTCATCAATGTTTCTGTGCCAGAGATCTTAACCAATAGAGAATGTTCTACAACACCATCTAAAGACCATGAGCTTGAGACTCAGAGAAAAGAGCAAGAGAAACATGAGCCTGAGACTTTATGGAAAGAATACAATGAAAATCTAATAGAAGAAAACCATTTGGATTCTGGTGTTTATCGTTGTCATTCCTCGTTATCCCATTGTCCAGCGTTTACGAGAGAATCTCCTCCAGCTGATTCTTTAGCTAGATCTCTGCGTGCCTGTCATTCCCAGCCATTGTCCATGTTGGAGTATGCTCAAAGCTCTTCAACAAACATATTAAGTCTGGCAGAACATCTTGGTACCCGAATTTCTGATCATGTTGCAGTGACACCTAATAAACTTTCTGAGGATATGGTGAAATGTATATCAGCTATATACTGCAAGCTTGCAGACCCTCCCATGACTCATCCAGGCCTCTCATCTCCAAGTTCATCCTTGTCCTCGACAAGTGCCTTTTCCATTGGAGATCAAGATGACATGTGGAGTCCAAGGTTCAAGAATAATTCCTCTTTTGATGTACGGTTGGATAATCCTTTCCACGTAGAAGGACTCAAGGAGTTTAGCGGTCCGTACAGCACCATGGTTGAAGTCTCGTGGCTTTATAGAGAGAATCAGAAGTCTGGTGATACTGAGAAATTGCTTCAGAATTTCAGGTCACTTATTTGTCGACTAGAACAAGTAGACGCTGGTAGGCTGAAACACGAGGAGAAGCTAGCTTTTTGGATCAACATACACAATGCTTTAGTGATGCATGCATTTTTGGCTTATGGGATTCCACAAAACAATGTGAAAAGAGCTTTTCTTCTTTTGAAGGCTGCATATAATGTTGGGGGTCATACGATTAGTGCTGACACAATACAGAGTACTATACTTAAGTGCCGGATGTCTCGTCCAGGCCAGTGGCTGCGCTTGTTATTTTCTCCAAGGACAAAATTCAAGACTGGAGATAGACGACAGGCTTATGCACTGGAGCATCCTGATCCTCTTTCACTCTTTGCACTCTGTTCAGGAAACCATTCTGATCCCGCGTTGCAAAAGTTGTTTACATATGCTTTGACAATGCCATATGCAATGGTACGTATATACACACCAAAGAGTGTGTTTCAAGAGCTAGAAGTTGCAAAGAACGAGTACATTCGAGCCAACTTAGGAGTACGCAAGGACCAAAAAATACTATTACCAAAGCTTATTGAGTCATTCAGCAAGGACTCGGGTTTGTGCCCCAACGGTGCCATGGATATGGTCCTGGAATCTCTACCCGAATCCCTCAGAAAGAGTGTTAAGAAATGTCAGCTTGGAAAATCCCGGAAGTGCATAGAATGGATTCCACACAACTTCAGTTTTCGATACCTTATATCTAAGGATATGGTAAAATGA 2010 0.4204 MGIVLHLSSDSLSSKNSVFGGFQLWGLKGVEEIKCWDCDLRQGTNVQRVFLIRKKIEEDNPDNRIQASDRKKLDMGYLTECDKAGKNRTPTNEVHSTLKQEILQLERRLQDQFQVRGTLEKALGYRSSSLVNSNEMMIPKPATELIREIAVLELEVVYLEQHLLSLYRKAFDQQLSSVSPTSKDESIKFPLTTLSARFINVSVPEILTNRECSTTPSKDHELETQRKEQEKHEPETLWKEYNENLIEENHLDSGVYRCHSSLSHCPAFTRESPPADSLARSLRACHSQPLSMLEYAQSSSTNILSLAEHLGTRISDHVAVTPNKLSEDMVKCISAIYCKLADPPMTHPGLSSPSSSLSSTSAFSIGDQDDMWSPRFKNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEVSWLYRENQKSGDTEKLLQNFRSLICRLEQVDAGRLKHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRAFLLLKAAYNVGGHTISADTIQSTILKCRMSRPGQWLRLLFSPRTKFKTGDRRQAYALEHPDPLSLFALCSGNHSDPALQKLFTYALTMPYAMVRIYTPKSVFQELEVAKNEYIRANLGVRKDQKILLPKLIESFSKDSGLCPNGAMDMVLESLPESLRKSVKKCQLGKSRKCIEWIPHNFSFRYLISKDMVK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00643 669 PANTHER UNCHARACTERIZED 72 668 - -
Vian10g00643 669 Pfam Protein of unknown function, DUF547 442 590 IPR006869 -
Vian10g00643 669 MobiDBLite consensus disorder prediction 212 234 - -
Vian10g00643 669 MobiDBLite consensus disorder prediction 214 234 - -
Vian10g00643 669 Pfam Leucine-zipper of ternary complex factor MIP1 92 173 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00643 Vian-Chr10 6103463 6107817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00643 - - gmx:100813952 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00643 10 6103463 6107817 Vian1g01732 1 20111383 20115272 PCT