Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01711 ATGGGTTCAGAAAATAAGCATTTTGTTCTGGTGCATGGAGCTTGCCATGGAGCTTGGTGCTGGTACAAGCTCAAGCCCCGCTTGGAATCTGCTGGCCACAAGGTCACCGTGCTCGACCTTGCAGCTTCCGGCATCAACCTGCAGAAAATTGAAGATGTTCATACTTTCTCACAGTACTCTGAGCCTTTGCTGCAGCTATTGGCGACAATTCCCCCAAATGAAAAGGTTATTCTGGTCGGTCATAGCCTTGGGGGACTCAACATAGCACTTGCCATGGAGAAATTCCCAGAAAAAGTTTCGGTTGGTGTTTTCTTAACGGCTTTTACTCCAGACATTGAACACCACCCATCTTATGTTCTGGAAAAGTACAACGAGAGGACTGACTCGGCGGCATGGTTAGACACTGAATTTTCTCCTTGTGGAAGCAAAACATTAATGTTCTTTGGTCCCATTTTCATATCTGACAAGCTGTATCAGCTCACCTCCATCGAGGACCTTCAATTGGCCAAGAGTTTAGCAAGGCCATCGTCTCTCTTCATGGAAGACTTGTCAACGCAAAAGAAGTTCTCGAAAGATGGATATGGGTCAGTTCCACGTGTCTTTGTTCTATGCACCGAGGACCTTGCAATTCCTGTGGAATATCAGCACTGGATGATCCAAAATGCTGTCTTCAATGACGTTCTAGAGATCAAAGGTGCAGATCACATGCCTATGCTTTGCGTGCCACAACAACTCTTCAATTCTCTCCAACAGATAGCTACTAAATATTAA 771 0.454 MGSENKHFVLVHGACHGAWCWYKLKPRLESAGHKVTVLDLAASGINLQKIEDVHTFSQYSEPLLQLLATIPPNEKVILVGHSLGGLNIALAMEKFPEKVSVGVFLTAFTPDIEHHPSYVLEKYNERTDSAAWLDTEFSPCGSKTLMFFGPIFISDKLYQLTSIEDLQLAKSLARPSSLFMEDLSTQKKFSKDGYGSVPRVFVLCTEDLAIPVEYQHWMIQNAVFNDVLEIKGADHMPMLCVPQQLFNSLQQIATKY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01711 256 FunFam (S)-hydroxynitrile lyase 3 256 - -
Vian1g01711 256 PANTHER METHYLESTERASE FAMILY MEMBER 5 254 IPR045889 -
Vian1g01711 256 Pfam Alpha/beta hydrolase family 8 239 IPR000073 -
Vian1g01711 256 Gene3D alpha/beta hydrolase 2 256 IPR029058 -
Vian1g01711 256 SUPERFAMILY alpha/beta-Hydrolases 4 252 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01711 Vian-Chr1 19749053 19750509 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01711 7 170 Miscellaneous Gene Families AT5G10300 53.529 8.59e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01711 - - gmx:100796281 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01711 1 19749053 19750509 Vian1g01711 1 19749053 19750509 ECH
Vian1g01711 1 19749053 19750509 Vian10g00621 10 5954507 5955482 PCT