Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00621 ATGGAGGGGAAGAAGAAGAGACGTCTGGTGTTGGTTCACGGAGCCTACCATGGAGCCTGGTGTTGGTACAAGCTCTCTACCCTCCTCGATTCCGCCGGCCTTCAAGTCACGTCTCTCGACATGGCTGCATCCGGCATCCATCCAAACCAACTGCTCGATATCACTTCAGTTTCGCAATATGTTGAACCTTTGCTCCAATTTCTACGATCTTTACCACCAGAGGAACGAGTCATCCTTGTCGGTCATAGTTTTGGAGGTTTATGCATTTCTCTAGCCATGGAAATGTTCCCCCACAAAGTTGCAGCTGCTGTTTTCCTTACCGGTTGGATGCCTGGTCCCCACCTCAGCTATCTCTCACTGTTCCTAGAGTTCAAGCACAGGTTAAGCTTGAAATTCAATTTGGGCTCAAAGACTGTCACAGATGAAAATACCAACGATCATCCGAAGCGATATATGACATGTGATCTTCAAAACTTAGCATCCAACGTCTACCAACAATCTCCCCCAGAGGACTTGGCCCTGGCGTCTTCACTTTTGAGACCCTTTCCCATATTTGGTGACGAAGATTTGCGAGAGAATACACAACTGACGGAAGAGAACCATGGAACTGTGGCCAGAGTCTATATAGTGTGTGAACAGGACAAAATAATGGAGCAGGATTTTCAACTGTCAATGGTTGAAAGAAACCCTCCTAATGAGGTCAAAGTGATTGCTGGAGCTGATCACATGCCCATGTTGTCTAAACCACAACAGCTTTTCTCTTACCTTCAAGAGATTGCCGACATCTATTACTAG 795 0.4642 MEGKKKRRLVLVHGAYHGAWCWYKLSTLLDSAGLQVTSLDMAASGIHPNQLLDITSVSQYVEPLLQFLRSLPPEERVILVGHSFGGLCISLAMEMFPHKVAAAVFLTGWMPGPHLSYLSLFLEFKHRLSLKFNLGSKTVTDENTNDHPKRYMTCDLQNLASNVYQQSPPEDLALASSLLRPFPIFGDEDLRENTQLTEENHGTVARVYIVCEQDKIMEQDFQLSMVERNPPNEVKVIAGADHMPMLSKPQQLFSYLQEIADIYY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00621 264 SUPERFAMILY alpha/beta-Hydrolases 3 259 IPR029058 -
Vian10g00621 264 Gene3D alpha/beta hydrolase 2 264 IPR029058 -
Vian10g00621 264 PANTHER METHYLESTERASE FAMILY MEMBER 6 260 IPR045889 -
Vian10g00621 264 Pfam Alpha/beta hydrolase family 9 252 IPR000073 -
Vian10g00621 264 FunFam (S)-hydroxynitrile lyase 4 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00621 Vian-Chr10 5954507 5955482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00621 4 111 Miscellaneous Gene Families AT5G10300 51.852 3.30e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00621 - - gmx:100818925 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01711 1 19749053 19750509 Vian10g00621 10 5954507 5955482 PCT