Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01636 ATGAAGAACACAAACACCAACACCAAATTCATCCTTCTCCACCCTTATATCCAAAAACAAGGAAGCTCCAATCGCTTATGGCTCCTAGCCTTTATATCAATCCTCACCCTCGCTTTCCTCGTCACTCTCATTTACACCAGAGAATCCACCTTCATCACCACCGCAACTTCTTCGGTCATTGCTTCTTCCAGTGCCCCAGTTTCTGGTCTCGGAACTGCTCCTTTGCCCGCCACCGTGATCAACACTCTTCTCCACTACGCCTCAAAATCCAACGACACCAACCGCATGCCACATTCAGACCTCAAACCCATCTCTGACGTGCTCCGCAAGTGCTCGTCCCCGTGCAACTTACTCATCTTCGGTCTCACATCCGAAACCCTTCTCTGGAAAGCCCTCAACCACTACGGCAGAACCGTGTTCATCGACGAAAACCGTTATTACGCTGCATATTACGAAGAACTGCACCCAGAAATCGACGCCTACGACGTGCAATACACCACCAAGAGAAGCGAGATGAAGGAGCTCATAGCCTCTGCTAAAGAACGGGTAGCCAACGAGTGCAAGCCAGTGCAGAATCTTCTGTTTTCAGACTGCAAACTGGGACTCAACGACCTTCCCAACCACGTGTACGAGGTTGACTGGGATATCATATTGGTGGACGGGCCACGTGGGGACTGGCCCGACGCCCCTGGAAGGATGTCGGCGATCTTCACCGCTGGTGTTCTGGCGAGGAGCAAAAAGGGTGGGAACCCTAAGACTCATGTGTTTGTGCATGACTTCTCCGGGGAAGTGGAAAAGGTTTGTGGGAGTGAGTTTCTATGCAGTGAGAATTTGTTGGAGGCAAGTGAGAATTTGGGGCATTATGTGGTGGAAAGAATGGACGAGAGCAGTGTTCAGTATTGTAAGAATCACTCTTCTTCTGGGTCAGGGAATAATGCTTCATCAACGTAA 951 0.5016 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTATSSVIASSSAPVSGLGTAPLPATVINTLLHYASKSNDTNRMPHSDLKPISDVLRKCSSPCNLLIFGLTSETLLWKALNHYGRTVFIDENRYYAAYYEELHPEIDAYDVQYTTKRSEMKELIASAKERVANECKPVQNLLFSDCKLGLNDLPNHVYEVDWDIILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFSGEVEKVCGSEFLCSENLLEASENLGHYVVERMDESSVQYCKNHSSSGSGNNASST 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01636 316 Pfam Polysaccharide biosynthesis 101 287 - -
Vian1g01636 316 NCBIfam TIGR01627 domain 75 301 IPR006514 GO:0045492
Vian1g01636 316 PANTHER OS11G0490100 PROTEIN 12 302 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01636 Vian-Chr1 18596524 18597474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01636 - - gmx:100790865 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00565 10 5314203 5315132 Vian1g01636 1 18596524 18597474 ECH
Vian1g01636 1 18596524 18597474 Vian1g01636 1 18596524 18597474 ECH
Vian10g00565 10 5314203 5315132 Vian1g01636 1 18596524 18597474 PCT