Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00565 ATGAAGAACACTAACACCAACACAAAATTCATTCTTCTCCACCCATATATCCAGAAACAAGGAAGCTCCAACCGCCTATGGCTTCTGGCCTTCATCTCCTTCTTCACCCTGGCCTTCCTCGCCACCCTCATTTACACCAGAGACACAACCTCATCCATCACCACCACCACCTCTTCCACCCCTTTATCTACTTTCACCAACACCCCTTTGCCTTCCTCCGTCATCAACACCCTCCTCCACTATGCCTCCAAATCCAATGACACCTACCACATGTCCCACTCGGATCTCAAAACCATCTCCGACGTCCTCCGAAAGTGCTCCTCACCGTGCAACTTCCTCGTCTTTGGCCTCACCCCAGAGACCCTCCTCTGGAAAGCCCTCAACCACAACGGAAGAACGGTTTTCATCGATGAAAACCGGTACTACGCCGCGTACTTCGAAGAAAAGCACCCCGAAATCGATGCCTACGACGTGCAATACACGACCAGAAGGAGCGAGATGAAGGAGCTGATAGCTTCCGCCAAAGAACAGTCGGGAAACGAGTGCAGGCCGGTGCAGAATCTTCTGTTTTCTGAGTGCAAGTTAGGACTCAACGATCTTCCCAACCACGTTTATGAAGTGGATTGGGATGTGATATTGGTGGACGGACCGAGAGGTGACTGGCCCGACGCCCCCGGAAGAATGTCGCCGATCTTCACCGCCGGCGTACTTGCCCGGAGCAAGAAGAGTGGGAACCCGAAGACGCATGTGTTTGTGCATGACTTCTCAGGGAAAGTGGAAAGGGTCTGCGGGAACGAGTTTCTGTGTAAGGAAAATTTGGTGGAGACAACGCACTCTTTGGGACACTATATTCTGGAAAAAATGGAGGAGAGTAGCGTGAAGTATTGTAAGGATCATAACCACTCATCAGGGTCTTCTTCTTCGTCTTAG 930 0.5118 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFISFFTLAFLATLIYTRDTTSSITTTTSSTPLSTFTNTPLPSSVINTLLHYASKSNDTYHMSHSDLKTISDVLRKCSSPCNFLVFGLTPETLLWKALNHNGRTVFIDENRYYAAYFEEKHPEIDAYDVQYTTRRSEMKELIASAKEQSGNECRPVQNLLFSECKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSPIFTAGVLARSKKSGNPKTHVFVHDFSGKVERVCGNEFLCKENLVETTHSLGHYILEKMEESSVKYCKDHNHSSGSSSSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00565 309 NCBIfam TIGR01627 domain 69 296 IPR006514 GO:0045492
Vian10g00565 309 PANTHER OS11G0490100 PROTEIN 12 297 IPR006514 GO:0045492
Vian10g00565 309 Pfam Polysaccharide biosynthesis 95 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00565 Vian-Chr10 5314203 5315132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00565 - - pvu:PHAVU_002G016200g 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00565 10 5314203 5315132 Vian1g01636 1 18596524 18597474 ECH
Vian10g00565 10 5314203 5315132 Vian10g00565 10 5314203 5315132 ECH
Vian10g00565 10 5314203 5315132 Vian1g01636 1 18596524 18597474 PCT