Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01630 ATGAACCTCTCTCAAGCCGAAAGCGAAGCGGGTCCATCAGCGATGGACTCGGTCGGAGCATCTCTTAGAGCCGCCATATCGCGGTGGGAGTTGGCGGTGTGGCGGCAGTACCAGCACGTGCTAGACAAATGGACGCCACACGTGGGGCGGCGGTGGGTGGGGTTGTTGGTGGTGGCGTTGATATACGCGCTGCGTGTGTACTTGGTGGAAGGGTTCTACTTAGTGTCGTACGGTTTGGGAATATACATCCTCAACCTTCTGATCGGGTTCCTCTCCCCTCAGGTGGACCCCGAGATTCTTGACGCAGAGGGCCCCACCCTCCCCTCCTCCGTTAACGACGAGTTTCGTCCATTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCAATCACAAAGGCCTTTTGCGTTGCATTTGTGATGACTTTCTTTAGTGCGTTTGATGTTCCTGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACGCTTACAATGAGGAGACAGATATCTCACATGATTAAGTACAAATATCTACCCTTCTCATCTGGAAAACAGCGCTATGATGGAAAGAGAGCATCACCTGAAAGCCCAAGCCTTTCAGAGGGCTGA 618 0.5307 MNLSQAESEAGPSAMDSVGASLRAAISRWELAVWRQYQHVLDKWTPHVGRRWVGLLVVALIYALRVYLVEGFYLVSYGLGIYILNLLIGFLSPQVDPEILDAEGPTLPSSVNDEFRPFVRRLPEFKFWYSITKAFCVAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYLPFSSGKQRYDGKRASPESPSLSEG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01630 205 Pfam Rer1 family 32 190 IPR004932 GO:0016020
Vian1g01630 205 PANTHER PROTEIN RER1 20 195 IPR004932 GO:0016020
Vian1g01630 205 PIRSF AtER_Rer1p 13 201 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01630 Vian-Chr1 18551286 18553255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01630 15 196 Miscellaneous Gene Families AT4G39220 66.129 7.76e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01630 - - gmx:100804538 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01630 1 18551286 18553255 Vian1g01630 1 18551286 18553255 ECH
Vian10g00561 10 5281804 5283231 Vian1g01630 1 18551286 18553255 PCT