Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00561 ATGGACGTAGGAGTCGCCGACGATCATTCCCCGGAAGCCACAATATCGCGGTGGAAATTTTCGGTGTCGCGGCAGTACCAGCACATGCTGGACAAAACGACGCCGCACGTCCTCCGCCGCTGGATCGGGTGTCTGGTGGTGGCTGCCGTCTACGTCCTCCGCGTGTACTTGGTTCAAGGCTTTTACATCGTCTCCTACGCCCTCGGTATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTCATGACGGCCCCACCCTCCCCACCAGAGGATCCGATGAGTTTCGCCCCTTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTATTCTGGCCGATACTCCTTTTCTACTGGGTGGTCCTTTTCACACTTACAATGAGGAGACAGATTTCACACATGATCAAATATAAATATGTTCCATTCTCATTTGGGAAACAGCGCTATGATGGAAAGAGAGCACCAGCAGATAGCACAAGTCCAACCGCGGACTGA 579 0.525 MDVGVADDHSPEATISRWKFSVSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKRAPADSTSPTAD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00561 192 Pfam Rer1 family 19 177 IPR004932 GO:0016020
Vian10g00561 192 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
Vian10g00561 192 PANTHER PROTEIN RER1 6 181 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00561 Vian-Chr10 5281804 5283231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00561 1 185 Miscellaneous Gene Families AT4G39220 68.617 1.77e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00561 - - gmx:100805147 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00561 10 5281804 5283231 Vian10g00561 10 5281804 5283231 ECH
Vian10g00561 10 5281804 5283231 Vian1g01630 1 18551286 18553255 PCT