Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01504 ATGGCAGAGTTTCCAGGATATATTCGTTACTGCTTGAACACAGGGAAACTTCTCCTTTTAGCAGTTTTGGTCTCTGGAGGAGTTGTCTTGCACATTTTGGCATGTGCATTATATAAAAATTGGTGGCCAATGCTAACTGTTATAACATATGTGATTCTTCCAGTACCTTTGCTCTTCTTTGCGGGATCTGAACGTTCTTCTGTATTTTCTGAATCAGATAACACCAGCTGGGTGAATGCAACCAAGTTCATAAGTGGGGTATCAGCTGTTGGAAGCATTGCCATTCCAGCCATATTAAAGCATGCTGGTGTTATCAGTTGGGGAGCACTTGCTATGGAACTCTCTTCATTCTTTGTGTTTGTATCTGCCATAATGTTTTTCATAAGGATGAACGATGAAGATGATTATAGTATTCTTTGA 420 0.3976 MAEFPGYIRYCLNTGKLLLLAVLVSGGVVLHILACALYKNWWPMLTVITYVILPVPLLFFAGSERSSVFSESDNTSWVNATKFISGVSAVGSIAIPAILKHAGVISWGALAMELSSFFVFVSAIMFFIRMNDEDDYSIL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01504 139 PANTHER LEPTIN RECEPTOR-RELATED 15 136 IPR007262 -
Vian1g01504 139 Pfam Vacuolar protein sorting 55 18 134 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01504 Vian-Chr1 16650869 16651594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01504 1 135 EF-hand Containing Proteins AT1G32410 63.704 7.56e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01504 - - gmx:100775400 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00444 10 4101785 4106960 Vian1g01504 1 16650869 16651594 PCT