Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01385 ATGGAACATCATAAACCGTTGTTACCTACTTCCTCTCACGCCGCTCCAACCCCAACCACTCGCAAGGACCTTCTTTTCATCGTTTGCGGCTTGCTCTTCCTCTCTTCCCTCGTCGCCTATGGGGGTTACAGGGCCTCCGGCGTGCCTCATACTCACGTTTCATCACCTACATCCAACCATCAACAAGATCACCAAAGTCCCACATCGCTGCTTTCTTCCCAATGGTACCCTGTTTCAAGGGGTGTTTCTTCCGGGGTGTCGGAGAAGTCATCGAACTTGTTATTCGCCAGTGAAGGAGGAGCTTCCGAAGCATTTCCTTGGGACAATAGCATGTTGTCTTGGCAGAGAACTTCTTTTCATTTCCAGCCAGAGAAAAACTGGATGAACGATCCTAATGGTCCTATGTACTACAAGGGATGGTATCACTTTTTCTACCAATACAATCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCGGTGTCAAGGGACATGATCCATTGGCTTCACCTTCCATTGGCAATGGTGGCTGATCAATGGTATGACAAGCAAGGCGTGTGGACAGGCTCAGCCACCATCTTACCAAATGGTGAAATCATCATGTTATACACAGGTTCCACCAATGAGTCAGTGCAAGTTCAAAACCTGGCATACCCTGCTGACCCCTCTGACCCTCTGCTTCTGGATTGGATCAAACACACCGGCAACCCGGTTTTGGTCCCACCACCAGGCATTGGTGCCAAGGACTTTCGTGACCCTACAACTGCATGGCTCACCTCTGAAGGAAAGTGGCGCATAACCATAGGATCCAAGCTTAATAAAACTGGCATTGCTTTGGTTTATGACACTGAGGACTTCAAGACCTTTGAGCTTAAGGAGGGGCTGCTTCGAGCTGTCCCTGGCACTGGCATGTGGGAGTGTGTCGACTTCTTCCCTGTGTCCAAGAAAAATGGAAATGGATTGGATACCTCTGTTAATGGGGCTGAGGTCAAGCATGTCATGAAGGTCAGCTTGGATGATGATAGACATGATTACTACGCCATAGGGACTTACGATGATAACAAAGTTCTGTTCACACCAGATGATGTTAAGAATGATGTTGGTGTTGGTTTAAGGTATGACTATGGAATATTCTATGCATCCAAGACATTTTTTGATCAGAACAAGAACAGGAGAATTTTGTGGGGTTGGATTGGAGAATCTGACAGTGAATATGCAGATGTTACCAAAGGCTGGGCTTCAGTTCAGAGTATTCCAAGAACTGTGAGGCTTGATACGAAGACTGGCAGCAACTTACTTCAGTGGCCTGTTGCTGAGGTGGAGAGTTTGAGATTGAGAAGTGATGAATTCAAAAGTTTGAAGGCAAAACCAGGGTCAGTGGTGTCACTAGATATTGAAACAGCCACACAGTTGGACGTTGTTGCGGAGTTTGAGATAGACACGGAATCCCTACAGAAAACAGCTGAATCCAATGAGGAGTTCACATGCAGTAGCAGCGGTGGAGCTGCACAACGTGGTGCCTTGGGACCTTTTGGTCTTCTGGTTTTGGCTGATGAGGGGCTTTCTGAGTATACTCCTGTGTATTTCTATGTCATTAAAGGAAGAAATGGAAATCTTAGGACTTCCTTTTGCTCTGATCAATCAAGGTCTTCTCAGGCAAATGACGTTCGCAAGCAAATCTTTGGGAGCGTTGTTCCAGTACTTAAAGGCGAAAAGTTTTCCATACGGATGCTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGAACGTGTGTAACATCTCGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGATTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCCATTCAAACCAGATCAGAAGAGCTAA 1950 0.4646 MEHHKPLLPTSSHAAPTPTTRKDLLFIVCGLLFLSSLVAYGGYRASGVPHTHVSSPTSNHQQDHQSPTSLLSSQWYPVSRGVSSGVSEKSSNLLFASEGGASEAFPWDNSMLSWQRTSFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTFELKEGLLRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNKVLFTPDDVKNDVGVGLRYDYGIFYASKTFFDQNKNRRILWGWIGESDSEYADVTKGWASVQSIPRTVRLDTKTGSNLLQWPVAEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEFEIDTESLQKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNLRTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSIRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFKPDQKS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01385 649 SUPERFAMILY Arabinanase/levansucrase/invertase 113 439 IPR023296 -
Vian1g01385 649 CDD GH32_Fruct1-like 126 426 - -
Vian1g01385 649 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 450 633 - -
Vian1g01385 649 Gene3D - 450 633 - -
Vian1g01385 649 Gene3D Glycosyl hydrolase domain; family 43 124 449 IPR023296 -
Vian1g01385 649 ProSitePatterns Glycosyl hydrolases family 32 active site. 120 133 IPR018053 GO:0004553|GO:0005975
Vian1g01385 649 SMART glyco_32 120 593 IPR001362 GO:0004553|GO:0005975
Vian1g01385 649 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 109 636 - -
Vian1g01385 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 438 637 IPR013320 -
Vian1g01385 649 Pfam Glycosyl hydrolases family 32 N-terminal domain 120 438 IPR013148 -
Vian1g01385 649 Pfam Beta-fructofuranosidase, N-terminal domain 4 112 IPR021792 GO:0004564
Vian1g01385 649 Pfam Glycosyl hydrolases family 32 C terminal 441 632 IPR013189 -
Vian1g01385 649 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 124 450 - -
Vian1g01385 649 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01385 Vian-Chr1 15165217 15168897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01385 22 641 Glycoside Hydrolase AT1G12240 66.137 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01385 K01193 - gmx:100788844 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01385 1 15165217 15168897 Vian1g01385 1 15165217 15168897 ECH
Vian10g00351 10 3154830 3158665 Vian1g01385 1 15165217 15168897 PCT