Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00351 ATGGCACGCTCCCTCTCCTCTCATTCCGAACTCCCTTGTTCCTACGTTCCTATACCCGACGGATCCTATTCTCCGGCGGAGCCTCCAAGACACGTGACGAAAAAGGTGCTTCTCATCTCATCTGTGTTGCTCCTGCTGCTTCTGTCCTTGGTGACCTTCAATGCCTACTACCCGCATTCATCTGGAGACGGAGATCGTGCTTCATTAACACCAACAACGCCCGATGAATTCGAATTCAGCCCTCACACGGTACCAAGCTCAATGTTGAAACCATTTTCACGTGGCGTCTCTTCAGGGGTGTCGGAGAAGTCCAGCTGGATGTTGAAGAGCAGCAATGGAGAATCCTATCCTTGGAGCAATAGCATGCTGTCATGGCAGCGAACGGCTTATCACTTCCAGCCTGAGAAGAATTGGATGAACGTGTTGAATGTAAAGGATACTCACTTTTTTCTTGTGTCTCTGTGGGTGTGGCTTCGGCTTGCTGTGCCTGGGGAACTTGGTTTGTCTGCTTCAGATCCTAATGGTCCTATGTACTACAAAGGGTGGTATCACTTCTTCTACCAATACAATCCGAAAGGTGCAGTTTGGGGTACCATAGTTTGGGGGCACGCTGTATCAAGGGACTTGATTCACTGGCTTCACCTTCCACTGGCAATGGTGGCTGATCAATGGTATGACCAAAACGGTGTGTGGACAGGCTCTGCCACCATCTTACCCGATGGTCAAGTCATCATGCTATACACTGGTTCCACCAACGAGTCAGTGCAGGTCCAAAACCTTGCATACCCTGCAGATCCCTCTGATCCTCTCCTTGTTGATTGGATCAAATACCCTTCAAATCCAGTTCTGTTCCCTCCACCAGGCATCGATACCAAGGATTTTCGTGACCCCACCACAGCTTGGCTCACCTCAGAAGGCAAGTGGCGCATCAGTATTGGTTCAAAGCTTAACAAAACTGGCATAGCCTTGGTTTATGATACCAGTGACTTTAAGACCTACGAGCGTGTGGAGGGACTGCTCCGTGCTGTGCCTGGCACTGGCATGTGGGAGTGTGTTGACTTCTTTCCAGTATCCAGTGAGGGTGAAAATGGCTTGGATGCTTCAATCAATGGGGAGAATGTAAAGCATGTGGTGAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCAGTGGGGACTTACGATGAGAAGAATGCCAAGTTCACACCAGATGACTTGAAGAACGATGTTGGTATTGGACTCAGATATGACTACGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGAAGGAGAGTGTTGTGGAGTTGGATTGGAGAGTCTGATAGCGAATATGCTGACGTAGCCAAAGGTTGGGCATCAATTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAACTGGTAGCAGCTTACTTCAATGGCCTGTAGCAGAGGTGGAAAGTTTGAGATTGGGAAGCAACGAGTTTGAAAATTTGAAGGTGAAGCCAGGGTCAGTGGTGCCACTTGAAGTTGGAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATAACAAAGCCTTGGAGATGACTGGCCAATCCAATAAGGCGTACGAGTGTAGCACCAGTGGTGGAGCAGCAGAACGTGGTGCCTTAGGACCATTTGGTCTTCTAGTTTTGGCTGATGATGATCTTTCTGAATACACTCCCACATACTTTTACGTGGTTAAAGGAAACGATGGACAACTTAAAACTTCCTTTTGCTCTGATCAATTAAGGTCTTCTCTAGCAACTGATGTTGGTAAGAAAATCTTTGGAAGCTCTGTTACAGTACTAGAAGATGAAAAACTGTCAGTGAGGATCTTGGTGGACCATTCTGTGGTGGAAAGTTTTGCTCAAGGTGGAAGAACATGCGTGACATCTCGAGTTTATCCAACGAAGGCAATCTATGGAGCTGCTAGATTGTTTTTATTCAATAATGCTACCGAAGTCACTGTGACTGCTTCAGTTAAAGTTTGGCAAATGAATTCTGCATTCATACGCCCCTTCAACCCACAACAAAGTAATTCTATATAA 2076 0.4629 MARSLSSHSELPCSYVPIPDGSYSPAEPPRHVTKKVLLISSVLLLLLLSLVTFNAYYPHSSGDGDRASLTPTTPDEFEFSPHTVPSSMLKPFSRGVSSGVSEKSSWMLKSSNGESYPWSNSMLSWQRTAYHFQPEKNWMNVLNVKDTHFFLVSLWVWLRLAVPGELGLSASDPNGPMYYKGWYHFFYQYNPKGAVWGTIVWGHAVSRDLIHWLHLPLAMVADQWYDQNGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPSNPVLFPPPGIDTKDFRDPTTAWLTSEGKWRISIGSKLNKTGIALVYDTSDFKTYERVEGLLRAVPGTGMWECVDFFPVSSEGENGLDASINGENVKHVVKVSLDDDRHDYYAVGTYDEKNAKFTPDDLKNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWSWIGESDSEYADVAKGWASIQGIPRTVTLDKKTGSSLLQWPVAEVESLRLGSNEFENLKVKPGSVVPLEVGTAAQLDIVAEFEIDNKALEMTGQSNKAYECSTSGGAAERGALGPFGLLVLADDDLSEYTPTYFYVVKGNDGQLKTSFCSDQLRSSLATDVGKKIFGSSVTVLEDEKLSVRILVDHSVVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEVTVTASVKVWQMNSAFIRPFNPQQSNSI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00351 691 Pfam Glycosyl hydrolases family 32 N-terminal domain 171 480 IPR013148 -
Vian10g00351 691 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 169 492 - -
Vian10g00351 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 480 679 IPR013320 -
Vian10g00351 691 Pfam Beta-fructofuranosidase, N-terminal domain 14 123 IPR021792 GO:0004564
Vian10g00351 691 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 120 678 - -
Vian10g00351 691 Gene3D - 492 675 - -
Vian10g00351 691 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 492 675 - -
Vian10g00351 691 Pfam Glycosyl hydrolases family 32 C terminal 483 674 IPR013189 -
Vian10g00351 691 CDD GH32_Fruct1-like 172 468 - -
Vian10g00351 691 SMART glyco_32 131 635 IPR001362 GO:0004553|GO:0005975
Vian10g00351 691 SUPERFAMILY Arabinanase/levansucrase/invertase 124 481 IPR023296 -
Vian10g00351 691 Gene3D Glycosyl hydrolase domain; family 43 169 491 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00351 Vian-Chr10 3154830 3158665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00351 5 691 Glycoside Hydrolase AT1G12240 59.402 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00351 K01193 - gmx:100798772 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00351 10 3154830 3158665 Vian10g00351 10 3154830 3158665 ECH
Vian10g00351 10 3154830 3158665 Vian1g01385 1 15165217 15168897 PCT