Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01259 ATGGAGCAATACTGGTCTGGAAGTGCCCTCAACGAGAACAAAGGGATGGTAGATAATTTGCAGAGTTATGGAATTATTTCTTCCAGGAAGGTAGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTGCCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATAGGCTACAATGCTACTATCTCTGCGCCACATATGCATGCAACGTGCCTTCAGTTGCTGGAGAAGAATTTGCAGCCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTAACTGGATGCTTTGCCTTGATGGTAGGACCTCAAGGCCGTGCTGTTGGTGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCACTGAAAGATGGTTCCCTTTCAGTGCATTGTGGTGATGGGAGGCAAGGTTGGCCTGATATTGCTCCATATGATGCCATTCATGTGGGAGCAGCGGCACCAGAAATTCCTCAACCACTTATTGACCAGTTGAAGCCGGGCGGTAGAATGGTTATTCCTGTTGGGAACATATTTCAAGATTTAAAGGTCTTGGACAAGAACTCCGATGGTTCTATCAGTATCCGGACTGAGACTTCGGTTCGTTATGTGCCTCTCACTAGCAGAGAAGCTCAGTTACGTGGTTAG 690 0.4609 MEQYWSGSALNENKGMVDNLQSYGIISSRKVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRALDVGSGTGYLTGCFALMVGPQGRAVGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHCGDGRQGWPDIAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVLDKNSDGSISIRTETSVRYVPLTSREAQLRG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01259 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 200 IPR029063 -
Vian1g01259 229 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Vian1g01259 229 NCBIfam protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
Vian1g01259 229 CDD AdoMet_MTases 86 189 - -
Vian1g01259 229 FunFam Protein-L-isoaspartate O-methyltransferase 4 229 - -
Vian1g01259 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Vian1g01259 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Vian1g01259 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 227 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01259 Vian-Chr1 13618298 13620570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01259 K00573 - gmx:100527082 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01259 1 13618298 13620570 Vian1g01259 1 13618298 13620570 ECH
Vian1g01259 1 13618298 13620570 Vian4g00920 4 13097890 13100158 PCT