Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00722 ATGTCGTCGTCACCGCAGAACGTAAAGCAGAGAGTCTTCGCATGCCTGACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCCGCTGCAGAACTCGAGTCCATCGCTCGGTGTCTCGATGCGGTCACCGTGCCAGCGTTCCTATCGTGCATGTACTCCACTGACGCGTCCGACAAGCCACCGGTCCGCAAGCAATGTGTGCAGCTGTTAGGGTTCCTGGCGGAGACGCATGGCAACATGCTCGCACCGTACCTGTCTAAAATTATCGGCAGCGTTGTGCGGCGCCTCCGCGACGCGGACTCGTCGGTGCGATCCGCGTGCGTGAGTTCAGTTGCGGCATTGTCGCGGCACGTCAGCAGGCAGCCGTTGCATTCGTTCGTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGTCGGAGCCGCGCTGTGTCTCGCCGCTGCGATCGATGGAGCTCCGGATCCGGACCCGGCCAGGCTGGCGAAGCTCTTGCCCCGATTTGAAAAGCTTCTGAAGCGCGACGGGTTCAAGGCGAAGCCCGGGCTGTTGACGCTAGTGGGAAGCGTCGTCGCTTCCGGCGGCGCGTCCGGTCACGCGCCCTTGAAGAGTTTGGTTCCGTGCTTGGTAGAAGCGTTGAGCAACGACGATTGGGCCACGCGGAAGGCTGCGGCGGAGACTCTCGTGGTGGTTGCCAACGTAGAGAGGAATTTCTTGTCGGAGTTCAAGGCCGAATGTGTGAGAGTTTTTGAAAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGACGTTATGAATCAGATGTTAGAAGCGTGGAAGCAGATTCCTGATGTTTCCGATGAAGTTACGCCACCTCCTAAACCGCAACCTTCTTCTAAAGGGAATTCAAGTGATGGACGCTATCCTGCTGTCTCTCAAAATTCATGTAGTCCTGGTTTAGTGATGGCCAATCTGCGGAAGAAAAATACACCTTTTAGCAGATTCAGTCCAGCAGATAGCTCTTCTGCTAGCAGTGCCAAGACTAGGAGTGCTTCAAGTAGCAACAACAACAAGAGAATGAGTTCGATTGTTTCCAGAAAACTAAATCATAAGAATTGGGATACCCAAGTTGCTGTGGCTGATCAGGGAGGTCTTCAGGAGATGGATGGAATTGTTTTGGAAAGTAACAAAATGGACAAAAGCAGATTTTCAAAGCCAGAAATGAAAAGGGCACTGCTATATAGAGGTTCTGACGATAGAATACACAAGTATGGTGGGTCCAAAGCTGGATCTCGAGTGGTTCCATATCATGAAGAAAGTCAAGACTCATTTCCTGTCAGTGATGTCTCTAAAGATCTGCATAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGCTACATCAGATTGAGAAGCAGCAGTCAAGTTTACTCGATCTTCTGCAGAAATTTATGGGGAGCTCACAGAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAATCTGATGTCCATGGCAACACATGTTGCATGCTACCCGGAACAGAGTTTTTGAGCTCCAAATTTTGGAGGAAAACACATGGTCGGCATTCAATCCCACGGTTCTCTAGATCAGGTGGCACTTCATCACTTGCTGCCACCAACTACCAAGCCGACAAGAATGGTGAAACCAAGTTGACAAACCATAGATTTAGGCCTGATGGAGGATTCGTCACTAATCCACTGGCAGAGATTCATGCAGATTCGAGGAATTTTGCTACATCGGAGCTAGTTTAA 1839 0.5073 MSSSPQNVKQRVFACLTKLSDRDTQSLAAAELESIARCLDAVTVPAFLSCMYSTDASDKPPVRKQCVQLLGFLAETHGNMLAPYLSKIIGSVVRRLRDADSSVRSACVSSVAALSRHVSRQPLHSFVKPLAEALFTEQDQNAQVGAALCLAAAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPGLLTLVGSVVASGGASGHAPLKSLVPCLVEALSNDDWATRKAAAETLVVVANVERNFLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVTPPPKPQPSSKGNSSDGRYPAVSQNSCSPGLVMANLRKKNTPFSRFSPADSSSASSAKTRSASSSNNNKRMSSIVSRKLNHKNWDTQVAVADQGGLQEMDGIVLESNKMDKSRFSKPEMKRALLYRGSDDRIHKYGGSKAGSRVVPYHEESQDSFPVSDVSKDLHRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGTEFLSSKFWRKTHGRHSIPRFSRSGGTSSLAATNYQADKNGETKLTNHRFRPDGGFVTNPLAEIHADSRNFATSELV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00722 612 Coils Coil 453 473 - -
Vian1g00722 612 FunFam TORTIFOLIA1-like protein 3 isoform A 1 359 - -
Vian1g00722 612 Pfam HEAT repeat 209 236 IPR000357 GO:0005515
Vian1g00722 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 580 IPR033337 GO:0005874|GO:0008017
Vian1g00722 612 MobiDBLite consensus disorder prediction 296 310 - -
Vian1g00722 612 MobiDBLite consensus disorder prediction 280 310 - -
Vian1g00722 612 MobiDBLite consensus disorder prediction 328 364 - -
Vian1g00722 612 Gene3D - 3 378 IPR011989 -
Vian1g00722 612 SUPERFAMILY ARM repeat 5 269 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00722 Vian-Chr1 7390042 7392626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00722 - - gmx:100789197 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00722 1 7390042 7392626 Vian4g00801 4 10525192 10527713 PCT