Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00610 ATGTTTAAGGTTAGGTGGGAAATGGAGGTTGCGAAAGGGAAGGAAGCTAAAAAAATTGTTTTGACCAAACCCTTCTCAATAGAAGGCGAATCTGACGCAGAGCCGTTTTATAGAGCTCCCAATCTCCTACGTCGCTTGTTAAGTTTACTCAAGAACGTGCGGCCAGGATCAGATCTCACAAACTTCCAGCTGCCGCCTGTGTTTAATTTGCCAAAATCTCAACTCCAATGCTATGGTGAATCAGTGTATTGCACATCTTCCAACTTGCTGAGCAAATGCAACAGTGAGCAGAGTCCAGTGGACAGGTTCACATCTGTGGTAGCATGGAGCATATCTACCACACGCCCTTCATCTTTTGGTGTGGCTCCTTATAATCCTATTCTTGGAGAGACACACCATGTTTCTAAGGGCTATCTCAATGTCCTACTGGAGCAGGTTTCAGTCAACCCTCCTGTGTCTGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAAATGATATGGTGGCAGCAACCTGTTCCAAAATTTCGTGGCACATCCATTGAAACAGAAGTGCATGGTAAACGGATGCTGAAGCTCCTAAATCATGGGGAAACATATGAAATGAATTGTCCTCGCCTTTCAATTAGAATTCTTCCGGTTCCTCGGATGGACTGGGTTGGCAATGTTAATATACGGTGCCCTGAGACAGGTCTTGTTGCTGAAATATCGTACACATCAAGTTACTCGCTTTTAGGATTTGGGGGAAATCGCAAATTGATCAAAGGGAAGATCCTTGACCCATCATTATTCAAAGTTCTCTACGAAGTTGATGGTCATTGGGATAAGACCGTTCAAGTGAAGGATACAAAAAGTGGAGAAATCAGGGTGATATATGATGCAAAAGAAGTCATTTCAGGTCTCAAAACACCTATCATCAAGAATGCAGAGGGTGTGTTGACAAGTGAATCAGCTGTTGTTTGGGGCGAGTTGAGTGAAGCCATAATGAAGAATGAATGGGAGAAAGCAAGAGAAGAAAAGGAAGGTGTGGAAGAAAGAGAGAAGAAGATGGTGAGAGAAAGAGGTATGAAAGGAGAAAGTTGGGTTCCTAAGAATTTTAGGGTGTCCTACAGCAAAGACACGAGAGAATGGAACTGTTCACCCATTCATAAATGGGTCCCTTTAGCCCCTATTATAGCTCCCTAA 1185 0.4346 MFKVRWEMEVAKGKEAKKIVLTKPFSIEGESDAEPFYRAPNLLRRLLSLLKNVRPGSDLTNFQLPPVFNLPKSQLQCYGESVYCTSSNLLSKCNSEQSPVDRFTSVVAWSISTTRPSSFGVAPYNPILGETHHVSKGYLNVLLEQVSVNPPVSALHATDEKENIEMIWWQQPVPKFRGTSIETEVHGKRMLKLLNHGETYEMNCPRLSIRILPVPRMDWVGNVNIRCPETGLVAEISYTSSYSLLGFGGNRKLIKGKILDPSLFKVLYEVDGHWDKTVQVKDTKSGEIRVIYDAKEVISGLKTPIIKNAEGVLTSESAVVWGELSEAIMKNEWEKAREEKEGVEEREKKMVRERGMKGESWVPKNFRVSYSKDTREWNCSPIHKWVPLAPIIAP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00610 394 Gene3D - 128 303 - -
Vian1g00610 394 FunFam Oxysterol-binding protein-related protein 4B 313 386 - -
Vian1g00610 394 Pfam Oxysterol-binding protein 48 322 IPR000648 GO:0008289
Vian1g00610 394 Gene3D - 313 384 - -
Vian1g00610 394 FunFam Oxysterol-binding protein-related protein 4C 127 305 - -
Vian1g00610 394 SUPERFAMILY Oxysterol-binding protein-like 46 378 IPR037239 -
Vian1g00610 394 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 46 367 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00610 Vian-Chr1 5929038 5933145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00610 K22285 - gmx:100813302 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00610 1 5929038 5933145 Vian4g00260 4 2757237 2760915 PCT