Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00267 ATGGATGCAAAATCCTCCCAAGCTGTTCTTCCCTCTGAGCCATTGATGTATCAGACATGGTTCTTGAAAGTTTCCATCCACTGTGAAGGTTGCAGGAGGAAAGTGAAGAAGGTCTTACAGAGCATAGATGGTGTTTTCACCACAACGGTTGACCCACAGCAGCAGAAAGTGACGGTCACCGGAAGCGTCGGCGTTGAGACGCTGATAAGGAAACTGGAGAAAGCCGGAAAACACGCCGAGATTTGGCCGGAGAATCTCGCGGCCGGGAAGGGAAATAACTCCGACAAAGACAAGCAGCAGCAGAAGAAAAAGAAGAAAAACGAACAAGGAGAAGAATCCGAAGGCAAGATTAATCACTCCACCACGACAAATGCAGTGGCTACCAATACCACCGCGAACACTAGCAAGAAAAAGACGAACGAAAAAAGTTCTGGGGAGAGGGGCAACGGCGAAAGCAAGAGCAGCGGCGGCGGCGGAGAAAATCAGTCTGCAGAATCGGAGAACAAGAGTGGTCAAAGCGAAGGAGTTGGGAAGAAAAAGAAAAAGAAAGAGATGGAAAAAAGTGAGAGTGATGGAAGTTCAGCATGTAACGGTGGAGCTGCGCACAGTGGATCCTCTGGGCAGGTGAATCTGAGCCCTACACGTCAGCAATTCAACCTGTATCCAGAAACTTACTGTTATCCCCCACTTGTGTATCTGGCAACTCACAACAGGTTATGTCCCATGGGAACAATGGGTGGTCCTTCCTACTATGTTTCACCATTGCCCTACATGTGTGCAGGCATAGACCACGATCCTTATCGCCTTCAATCTACGCCCTTCGTTCCCTTCGAGATCTTCAGCGACGAGAATGCAAATGGCTGTTCTATCATAGATGAGGTGTTAGGATTAGATGGCAAGCATGTCAATGTCACGTCCGAAGGGCATTTCGTGAAGACTGGACTGTGCTATGCAGGCAAAGCAGAGGCAAGGCAATGGAATGAAGCTACACATAAGAATCTTTTTCATGCTGCCAAATATGTTAAGCGAGGCCATGTGAGGGAATCAGGATGTGGACCTAAGGCATTGTAA 1071 0.4827 MDAKSSQAVLPSEPLMYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTVDPQQQKVTVTGSVGVETLIRKLEKAGKHAEIWPENLAAGKGNNSDKDKQQQKKKKKNEQGEESEGKINHSTTTNAVATNTTANTSKKKTNEKSSGERGNGESKSSGGGGENQSAESENKSGQSEGVGKKKKKKEMEKSESDGSSACNGGAAHSGSSGQVNLSPTRQQFNLYPETYCYPPLVYLATHNRLCPMGTMGGPSYYVSPLPYMCAGIDHDPYRLQSTPFVPFEIFSDENANGCSIIDEVLGLDGKHVNVTSEGHFVKTGLCYAGKAEARQWNEATHKNLFHAAKYVKRGHVRESGCGPKAL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00267 356 CDD HMA 22 80 IPR006121 GO:0046872
Vian1g00267 356 MobiDBLite consensus disorder prediction 95 115 - -
Vian1g00267 356 SUPERFAMILY HMA, heavy metal-associated domain 14 83 IPR036163 GO:0046872
Vian1g00267 356 Gene3D - 17 81 - -
Vian1g00267 356 MobiDBLite consensus disorder prediction 191 211 - -
Vian1g00267 356 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
Vian1g00267 356 MobiDBLite consensus disorder prediction 74 211 - -
Vian1g00267 356 Pfam Heavy-metal-associated domain 24 78 IPR006121 GO:0046872
Vian1g00267 356 FunFam Copper transport protein ATOX1 16 84 - -
Vian1g00267 356 MobiDBLite consensus disorder prediction 172 190 - -
Vian1g00267 356 MobiDBLite consensus disorder prediction 149 171 - -
Vian1g00267 356 MobiDBLite consensus disorder prediction 116 138 - -
Vian1g00267 356 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 13 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00267 Vian-Chr1 2364913 2367442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00267 - - gmx:100808829 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00267 1 2364913 2367442 Vian4g00142 4 1297244 1298530 PCT