Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00696 ATGGAGTCCTTTCAGAAGCAAATCAAAACCCAAACTCTGATTAAATTAATTTTAGTCTGTTCTTCATTTTTTACCATTTCAATCTGCGTATCAGTGCTAATCCTAGCCAAAACAAAGGTAATAGAACTGAGTTATTCACCACAAGTGTCACAGTCTGATCCTACTACCGTTGATCATCTTGTATTTGGAATTGCCTCAACCGGAAATTCATGGTTTCGGAGGAAGCAATACATAAAGCTATGGTGGAACAGCATACCCAATAAAACCATGAGGGGATGTGTTTTCGTAGATACCCTTCCACATGGAGAAAATGCCAACAACGATGCTTCTCTTCCTCCTCTCTGTGTCTCTCAAGACACTTCCAAGTTTCTCTACACTTACAGGGGTGGTCTACGCTCAGCAATCCGTTTGACACGTATTGTGAAAGAGATCGTGGCACTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCACAATCTGCTCAAAACACTTTCCAAATACGACCACAGGCTTTGGTACTATGTTGGGTCAACCTCAGAGATTTATGATGCCACCCAGGTTTTTGGTTTTGGAATGGCATTCGGTGGAGGTGGTTTTGCCATCAGCTCCTCCCTAGCACAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCACATCTGTATGGAAGCGATGCTAGGGTCTACTCTTGCATAACTGAACTAGGTGTCGGATTAACACATGAACCAGGTTTTCATCAGGTCGATTTGCGGGGAAATATCTTTGGCCTTTTGGCTTCTCATCCGTTAACTCCCTTATTGTCCTTACATCACCCAGATCACACTGATCCTATCTTCCCCAACATGCCAACCAAAAAATCACTGCAACGTTTATTCGAAGCTGTTCATGTCGATTCCGAGAGGATCCTGCAACAAACGGTTTGTTACGAAAAGAGGTTGTCATGGACAATTTCAGTTTCATGGGGCTATGCTGTTCAAGTGTTCCAGAACAACATGGTTTTGCCAGAGGTTTTGAGAGTGGAGAAAACATTCAGACAATGGTTGCCAGGAAATGTTTTTAAAGGAATATATAATTTCAACACAAGAGAATTTCACCATGACCCATGTAAAAGACCCACCATTTTCTACCAAGATGAAGTGTCTTCTGCCAAATATGGTAGCATAAGCAGTTACAAGAGACATTTTCAAAATTGTTCATACAATTCATCAATGAGTAAACTGGAAGTGATCAAAGTGGTGACAAATGAGTTACACCATGACAGCAAACAGACCCGAAGACGGCGGTGTTGTGATGTGTTGCCCTCTAATGCTGGTAACTTGATGGAAATTGCAATCAGAGAGTGCAATTATGAAGAACTGATTTTTATGAACTGA 1407 0.4165 MESFQKQIKTQTLIKLILVCSSFFTISICVSVLILAKTKVIELSYSPQVSQSDPTTVDHLVFGIASTGNSWFRRKQYIKLWWNSIPNKTMRGCVFVDTLPHGENANNDASLPPLCVSQDTSKFLYTYRGGLRSAIRLTRIVKEIVALNHSGVRWYVFGDDDTIFFPHNLLKTLSKYDHRLWYYVGSTSEIYDATQVFGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLASHPLTPLLSLHHPDHTDPIFPNMPTKKSLQRLFEAVHVDSERILQQTVCYEKRLSWTISVSWGYAVQVFQNNMVLPEVLRVEKTFRQWLPGNVFKGIYNFNTREFHHDPCKRPTIFYQDEVSSAKYGSISSYKRHFQNCSYNSSMSKLEVIKVVTNELHHDSKQTRRRRCCDVLPSNAGNLMEIAIRECNYEELIFMN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00696 468 Pfam Protein of unknown function, DUF604 196 441 IPR006740 -
Vian11g00696 468 Gene3D - 47 287 - -
Vian11g00696 468 FunFam Fringe-related protein-like 47 307 - -
Vian11g00696 468 PANTHER FRINGE-RELATED 13 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00696 Vian-Chr11 7358973 7360571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00696 54 434 Glycosyltransferase AT1G05280 55.013 1.59e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00696 - - gmx:100779943 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00696 11 7358973 7360571 Vian11g00696 11 7358973 7360571 ECH
Vian5g00896 5 29866225 29869249 Vian11g00696 11 7358973 7360571 PCT