Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00656 ATGGCCCACAAAAAGAGGGTTCCCATGTCCGCTCGTATGCAGTCTCCGACAAGTGCCTTCTTCATGGGCTCCAACGACGACCAGCTCGAACGGGCCCAGGCTCGTGCAGCCCGCGCCGCTGCCATCCGCCACAACTCCATTGCCGTCAACTTCCATTCGCACCCTCCCAAGTCTCCTTCCTGTCTCAACAAGCACCAGATTCTCGAGTTGTTCCACAACTGCATAAAGCTCGCTTCCGAAAATAAAATTAATCAGAAAAACACGTGGGAGTTGGATTTGATCGATCATCTCACTGATATTATTAGGGTTGAAGAAGGGAATCACGTGGAGACTAATTTTCAAATAGCAAGCTGCACTCTTGAAGCTGGAGTCAGAATATATTCCTTGAGGGTGGATTCGGTGCACTCGGATGCATATAAAGTCCTGGCTGGAATGAATAGAGCAGGCCAAGATAACCAGGAAGGCGCTACTTTAGGGAGTGTTAATACTGAAAATGGAGAGGCAAGCAGGAAGGAAGTTGAGAAAAAGTTGTCGCATTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATATAAAGAAGTTTGACGGTGATCTCAAATCTCTTTCTGTTTGTCACTTGTTTGTCATGTGGGACAGAGACTGTGCTGACAATGTATTTGTTTGTTCAGTTGCATTTGCAGTGGATCCACTCTATCACCATACATCAGCAAAATTTGATGAAGGTGGAGCCAAAAGCCTTTTGATGAATAATCTTGGTGTATATGGTAAATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCGCCGAAGTGCATAACTAGTCAAAATGATCATGATATTTCAGATACAATTGATCTTTCTTTCGCTAGAGACTGTGTTGAACAGATGATATTGAATATGCATACGAAGGATGCAATCTCTCCAACTCTCAGGATTATAGTAAACCAATCTGATGAAAATAATGGAAGGCCTTTTGCTTTTCAATCTTCTGGCGAGAAATCAGCTGAAGAGTTTGATGCCGCTATTGATTGTGAACTTGCCATTGGAAAAAAAGGATATGAGAACTGCTCATCTTGGAGTTATGATCACGATAGCCAAACATTTGCTGCTGAATGGGGCTTTAGTGACGCATACCCTAGTTTTCCAAGTTACCATGAGGAAAAAGAACCTAATATGGATGATATATTTGACAATGTTGATGGATATTTATTTTTGAGTCTGGGTTTTAGGTCAAAGAAAAATTCATGGGCAGGCCCTGATCATTGGAAATATCAAAAAGTTCAAGATGACTGGCACTACGAACCAGAGGATCTTATCAATTTATTTCTTTTGCCTCATGTAAAGTGTATTAGGAGGAGAGCGAGAAAGGTACCAGATGTCTTAGAAGAACAATGCTATAATAACGAACCATTCCCTTCCTGGGATAATGGAAGTGTTTGTGATGGTGATGTCACTGATGTAAATAATGACACGGAAGACTCTAGCACACTTATTTCTCTGCCTCGTCAAATCAATAAAATTGAAGTCCAGTATGACAAAATATCCAAACAAGTCAATGTGCAGGCTCTGAAAATAACACTTTGGGACCATATTCAAGAATGTATTCAACTTCCGTTTCAGGGTCACAGAGAAAAGGTATCTTTCAGGCATATATTGACAAACTTTCCAAGTAAATGTAATGCTGCTGCAACTATTAGTGACATATCTCCACATTTGTGTTTTATATGCCTATTACATTTGGCTAATGAGAAGGGGTTGAGCATCCAAAGTTGCCCCAACTTGGATGATCTTAGTATATGCCTACTTGATGATGGTGCCACTACCACCAGAACAATTTAG 1839 0.4105 MAHKKRVPMSARMQSPTSAFFMGSNDDQLERAQARAARAAAIRHNSIAVNFHSHPPKSPSCLNKHQILELFHNCIKLASENKINQKNTWELDLIDHLTDIIRVEEGNHVETNFQIASCTLEAGVRIYSLRVDSVHSDAYKVLAGMNRAGQDNQEGATLGSVNTENGEASRKEVEKKLSHLSTLESSFEVLNIKKFDGDLKSLSVCHLFVMWDRDCADNVFVCSVAFAVDPLYHHTSAKFDEGGAKSLLMNNLGVYGKCRVLFDSLEVPPKCITSQNDHDISDTIDLSFARDCVEQMILNMHTKDAISPTLRIIVNQSDENNGRPFAFQSSGEKSAEEFDAAIDCELAIGKKGYENCSSWSYDHDSQTFAAEWGFSDAYPSFPSYHEEKEPNMDDIFDNVDGYLFLSLGFRSKKNSWAGPDHWKYQKVQDDWHYEPEDLINLFLLPHVKCIRRRARKVPDVLEEQCYNNEPFPSWDNGSVCDGDVTDVNNDTEDSSTLISLPRQINKIEVQYDKISKQVNVQALKITLWDHIQECIQLPFQGHREKVSFRHILTNFPSKCNAAATISDISPHLCFICLLHLANEKGLSIQSCPNLDDLSICLLDDGATTTRTI 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00656 612 PIRSF Condensin_H 1 201 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 PIRSF Condensin_H 289 430 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 PIRSF Condensin_H 473 604 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 PIRSF Condensin_H 428 494 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 PIRSF Condensin_H 218 291 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 PANTHER CONDENSIN COMPLEX SUBUNIT 2 9 196 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 Pfam Condensin complex subunit 2 485 599 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 Pfam Condensin complex subunit 2 14 198 IPR022816 GO:0000796|GO:0007076
Vian11g00656 612 Pfam Condensin complex subunit 2 225 429 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00656 Vian-Chr11 6816311 6820143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00656 K06676 - gmx:100777082 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00656 11 6816311 6820143 Vian11g00656 11 6816311 6820143 ECH
Vian11g00656 11 6816311 6820143 Vian5g00954 5 30803330 30807488 PCT