Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00624 ATGGAGAACCCAGGTTGCACTTGTACATGGCGAACCTTGTACGAGAAACCACAAACCATGTTAGTTAACTTCAAAAACATGGTTGTAAAACTTGGAAAAGATGACCCCAGAAGGATTACTCACTCCCTTAAGTTCGGATTCGCACTGGTATTAATCACTATTTTTCAATATTTTCGTCCCTCCTTCTATGTTCTTGGTGACAACATAATGTGGGCCGTTATCACTGTCGTTTTTGTCCTGGAATTTTCTGTGGGTGCAACACTCGGAAAAGGTTTAAACCGGGTGTTGGCGACGGCGTTTGCTGGTGGTCTTGCTGTTGCACTCCGCGAAATAGCGAGTTTTTTTGGAGATAAGGGAGAGGTCGTAATGATTACGGTCTCTGTATTTTTCGTAGCTGGAACGGTGACGTTTCTGAGATTTTCCCCGCGACTGAAGGCGAAGTATGATTACGGGATGATTATTTTTAATTTGACCTTTTGTATAGTAGCTCTTTCGGAGACTACTGAGAATGAACTGTTGGAAGTTGCACAAGAGAGGTTATTAACGATCATAATTGGGACTTGCATAGCTATTACGGTATGTATTTGTATATGCCCCGTTTGGATTGGACAGGATCTTCACAATCAAATTGCTTCCAATATTGTAAAGGTCGCCGACTTTTTGGAAGGATTTAGAGATGAATACTTCAACAACTTAGGGAAGACAGCAGAGGCTGAGGATGATAAGTCATTTCTCCACAGATATGAAAGTATCCTCTCTTCAAAAACTAATGAAGAAACAATGGCTGTTTTGGCAAGATGGGAACCTCGTCATGGCAGGTTCAGATTTCGCCATCCATGGAAGCAATACTTGAAGCTCGGAAACCAAATTCGGTTGTGTGCTTACAAAATTAAAGCTCTCAGTGTCTTCCTCTTCCGTTCTGATCAAACCCCATATGAAATTCGAAGCAGGATTGAAGAGCCATGCGCAAACATCATAATGGAATCTGGGAAGGCTCTTAAGGAATCATCATTGATGCTTAAACAGTTTGCAAAGTCAGGAATGGCAAATCCCCATGTGGCGAATGCTAAAAATGCTTCTGAATCTCTTAAATCTGTTCTGAGAACAAACCCGTGGGAAGGAGCTGATCATCTGCAGATAATACCAGCAGCTACAGTGGCATCACTTCTGATTGATATAGTTTTCTGTGTTGAGAAAATTTGTGAAGCTGTTGAGGAACTTGCAAACCTTGCAAATTTTGAGCCCTCTGAGATACTCCATCGAGGAACAGTTCAACCTATTCCTGATACTGATGGTGCGGTTCATGTCATCACCATTGCTGAATGA 1326 0.4193 MENPGCTCTWRTLYEKPQTMLVNFKNMVVKLGKDDPRRITHSLKFGFALVLITIFQYFRPSFYVLGDNIMWAVITVVFVLEFSVGATLGKGLNRVLATAFAGGLAVALREIASFFGDKGEVVMITVSVFFVAGTVTFLRFSPRLKAKYDYGMIIFNLTFCIVALSETTENELLEVAQERLLTIIIGTCIAITVCICICPVWIGQDLHNQIASNIVKVADFLEGFRDEYFNNLGKTAEAEDDKSFLHRYESILSSKTNEETMAVLARWEPRHGRFRFRHPWKQYLKLGNQIRLCAYKIKALSVFLFRSDQTPYEIRSRIEEPCANIIMESGKALKESSLMLKQFAKSGMANPHVANAKNASESLKSVLRTNPWEGADHLQIIPAATVASLLIDIVFCVEKICEAVEELANLANFEPSEILHRGTVQPIPDTDGAVHVITIAE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00624 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 21 415 - -
Vian11g00624 441 Pfam Aluminium activated malate transporter 30 408 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00624 Vian-Chr11 6363395 6365409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00624 30 439 Miscellaneous Gene Families AT1G08440 44.976 1.53e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00624 K25841 - gmx:100786663 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00624 11 6363395 6365409 Vian11g00624 11 6363395 6365409 ECH
Vian11g00624 11 6363395 6365409 Vian5g00978 5 31221577 31223865 PCT