Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00589 ATGACAACTTCTTCCTTTTTCTTGGCTTTGCTCTTGCTGTCTCTTGCTTTTTCAGATTTATTTGTGCAAATCCGGGGCTTTAATTTTGGAATCAACTACGGGCAAGTCGGGGACAATCTTCCATCTCCCTCTGATGTGGTCGTTCTGATAAAATCTTTGAAAGTTTCTAAAATCAAGCTCTATGATTCTAATCCGGATATTCTATCTGCATTCGCCAATTCAGGTGTGGAATTCATAGTAGGAACGAAGAACGAGGATCTTCCTAGTTTGAGAGATCCTTCTAATGCTCAGAGGTGGATTCAGCAGCATGTTCAACCTTATATTTCACAAACTAAAATCACTTGCATAGCTGTCGGAAACGAGGTGTTCGACTACAATAACCCTCAGCTCACAACAAGTCTTCTTCCTGCAATGCAAAGTATGTATAATGCTCTGGTTAGCCTTGGACTTGCACAGAAGGTTACTGTTACTTCTGCTCATTCTTATAATGTTATAGCCTCTTCATTCCCTCCTTCATCTGGGGCGTTCAAGCAAGATCTGATACAGTATATTCAACCCATTCTTAACTTTCATGCTCAGATCAAATCACCCTTCCTTATTAATGCTTATCCCTTTTTTGCATATAAGGGAAACCCAAATCAGATTTCTTTGAACTATGTGTTGTTTCAGCCTAATTCTGGGTCTATTGATCCAGTTACCAATTTGCATTATGATAACATGTTGTTTGCTCAAATTGATGCTGTCTATGCTGCCATTAAGAGACTGGGCCATACTGATATTGAAGTAAAGATTTCAGAGACTGGTTGGCCTTCTAAAGGTGGCCCTGATGAATTTGGAGCCACACCACAGAATGCAGAAATATATAATAGCAATCTGTTGAAGAAGATAGAGCAGAAACAGGGCACTCCTGCAAGGCCATCTGTCCCTGTTGATGTTTTTGTTTTTGCACTTTTCAATGAGAATTTGAAACCTGGTCCTTTATCGGAGAGAAACTTTGGTCTCTATTATCCTGATGGAAACCCAGTTTATAACATTGGATTAGAAGGTTATCTCCCAGAAATGACTGGGGAGTTTGAGTCCAAATCTAACGTGCTGTCCATCAATTTTGTCTGCATATTTGCATTTTTGTTGTTCACTTGGGAGCTTTCAAGACATTGA 1158 0.3964 MTTSSFFLALLLLSLAFSDLFVQIRGFNFGINYGQVGDNLPSPSDVVVLIKSLKVSKIKLYDSNPDILSAFANSGVEFIVGTKNEDLPSLRDPSNAQRWIQQHVQPYISQTKITCIAVGNEVFDYNNPQLTTSLLPAMQSMYNALVSLGLAQKVTVTSAHSYNVIASSFPPSSGAFKQDLIQYIQPILNFHAQIKSPFLINAYPFFAYKGNPNQISLNYVLFQPNSGSIDPVTNLHYDNMLFAQIDAVYAAIKRLGHTDIEVKISETGWPSKGGPDEFGATPQNAEIYNSNLLKKIEQKQGTPARPSVPVDVFVFALFNENLKPGPLSERNFGLYYPDGNPVYNIGLEGYLPEMTGEFESKSNVLSINFVCIFAFLLFTWELSRH 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00589 385 Gene3D Glycosidases 28 351 - -
Vian11g00589 385 SUPERFAMILY (Trans)glycosidases 29 345 IPR017853 -
Vian11g00589 385 Pfam Glycosyl hydrolases family 17 30 345 IPR000490 GO:0004553|GO:0005975
Vian11g00589 385 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 348 IPR044965 GO:0004553|GO:0005975
Vian11g00589 385 FunFam Glucan endo-1,3-beta-glucosidase 14 27 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00589 Vian-Chr11 6017655 6019267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00589 1 346 Glycoside Hydrolase AT1G32860 54.598 7.26e-143 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00589 - - gmx:100786020 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00589 11 6017655 6019267 Vian11g00589 11 6017655 6019267 ECH
Vian11g00589 11 6017655 6019267 Vian5g01032 5 31933494 31935457 PCT