Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00479 ATGAGCGAGACGAGTTCATCGGCGCATGACCCCGAGCCTCCTATCCGGCTCAACCTGCCTCCCCTCTCACCGAGCCTCTTCGACGCGGAACCATCGGAGCTTCAACAACCCAATGGATCCGCCGTCCGACACTCCTCTGATCCCTCTAGCCCTACTAGCAGCGGTTACGCCGCCGAGAAGGGTAGCAGCACCGCCACAATTGTCTCCCAGGTCGAAGAGGTCCTTCATAACGAAATTCAGGAGATCACCATCGACGATCCCCAACCTCTCTCTCACTCCTCTCGGCTTCCCGGAAAACGACACAGCGATGAGGATGATGCTTCCATTTCATGGAGGAGAAGGAAGAAGCATTTTTTTGTTCTCAGTCATTCTGGCAAACCAATATATTCTAGGTACGGAGACGAACACAAGCTTGCTGGTTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTGGAAAATGGGGGTGATCATGTGAAATTGGTGAGGGCCGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTGGTCTGCATCAGCTGCACGGAAGAACCCTACGAGTCACTAAGGGGACAGTTGGAGCTTTTTCATGGCCAGATTATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACCTTGTTTTCTCTTCACTAGTCCACTCTTTTAGTTGGAACCCGGCTACATTTCTTCATGCCTATACTTGTCTGCCTCTTGCATATGCAACAAGGCAAGCTGCTAGTGCCATCTTGCAAGACGTTATTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACATAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTCTTGACCAACTTTGTTATGACTTCAGAAGCATTTTCTCCTGTTTGCTTGCCACGATACAATGCTTTGGCATTTTTGTACGCTTATATCCACTTTTTTTATGATGATACGTATTTGATGTTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGTAGGATTAGTATTGAAACTGTCCTTGTGAAGTCAAATGTCCTCAGTGAAGCTCAGAGATCCTTGGTAGATGGTGGGATGCGTGTGGAGGATCTTCCTCCCTTACCTTATTCAGGATCTTCACGTTTAGGTCAGCATAGGCTTCCATCAGATTCTCCTGAAAGATTAAGAGAACCTGATTGTGGCATTGGTGGTGCTGCTGGGTTATTGTATAGAGCTTACCAAAAACTTTTTGCATCCATGCATGATAAAGGACTTGGGCCACACAAAACCCAGTTTAGAAGGGATGAAAACTACGTACTGCTTTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGCCTGACTATTTTTGCACACTGAGATACGCAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGA 1530 0.4556 MSETSSSAHDPEPPIRLNLPPLSPSLFDAEPSELQQPNGSAVRHSSDPSSPTSSGYAAEKGSSTATIVSQVEEVLHNEIQEITIDDPQPLSHSSRLPGKRHSDEDDASISWRRRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELFHGQIIVILTKSVNRCFEKNPKFDMTPLLGGTDLVFSSLVHSFSWNPATFLHAYTCLPLAYATRQAASAILQDVIDSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLTNFVMTSEAFSPVCLPRYNALAFLYAYIHFFYDDTYLMLLTTSSDAFYHLKDCRISIETVLVKSNVLSEAQRSLVDGGMRVEDLPPLPYSGSSRLGQHRLPSDSPERLREPDCGIGGAAGLLYRAYQKLFASMHDKGLGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKPDYFCTLRYAGLGNKDLQSGVSMGKRCGK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00479 509 Pfam First Longin domain of FUZ, MON1 and HPS1 116 236 IPR043972 GO:0016192
Vian11g00479 509 MobiDBLite consensus disorder prediction 1 63 - -
Vian11g00479 509 MobiDBLite consensus disorder prediction 80 107 - -
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 133 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 168 182 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 219 231 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 315 338 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 460 474 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 248 269 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 134 154 IPR004353 GO:0006623
Vian11g00479 509 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 343 369 IPR004353 GO:0006623
Vian11g00479 509 MobiDBLite consensus disorder prediction 29 63 - -
Vian11g00479 509 Pfam Second Longin domain of FUZ, MON1 and HPS1 277 361 IPR043971 GO:0016192
Vian11g00479 509 PANTHER SAND PROTEIN-RELATED 36 482 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00479 Vian-Chr11 4633945 4639457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00479 K20195 - gmx:100816794 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00479 11 4633945 4639457 Vian11g00479 11 4633945 4639457 ECH
Vian11g00479 11 4633945 4639457 Vian5g01171 5 34206120 34211794 PCT