Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00434 ATGTTGTCCATTTTCCGTCAATACACCTTCGACGACTCGTTCGAACAAGTCTTCGTCTCGAACAAGTTCCTGAAGGAGTACCAGATCGCACTCACCTTCGCCACCGACTACGACGACGACGACCACCCCACCAACGGCATCTTCCGCCCCACCTGGGACCTCCAGAAGGTGACACCGGAAGCCATCGAGCTGTTCAAGGAGAAGGGCCGCAGCATGGACGTGGACGTGAAAGTGTTCATCTCCATCGGCAACCGCGGCACCCACCAGCCCTTCAAATCCCTCGACAACAAAACATGGATCGCCAACGCCACCCAGTCGCTCACAAACCTCATCCAGTGCAAGGACCTGAACCTCCACGTAGACGGCATTGACGTGCTGTACGAGCAAATCGATGCCTCCCCCGGTGACTTTATCCAGTGCGTGGGACAGCTGATAAAGAACCTCAAGGAGAATGGGGTAATCACCGAAGCTTCGATTTCCCCCACGTTTAACCTGAACAAGGAGTTCTACTCTCGTTTGTACAGTTCTGTGTCGTTCTTGGTTGATTTTGTGGATTACCAGTTCCAGAAGGAGGTTGATTTTGTTATGAATCCCGGTGTGCTGTTGCAGAGGTACAATGAACTGACCAAGGTTTATCCGAGAAGGAAGCTGTTGGCTGGGTACAGCGCAGAGAACGAGGACTGGACCACTCTTTCACCCATCGTCTTCTTCCTCGGTGGCATGGACATTCTCAAGAAGAGAAAGGCTCCTGGAATTTCCATTCATTACCATAATTTCTATGCTCAATCTTCTCCTCAACAATGA 804 0.5137 MLSIFRQYTFDDSFEQVFVSNKFLKEYQIALTFATDYDDDDHPTNGIFRPTWDLQKVTPEAIELFKEKGRSMDVDVKVFISIGNRGTHQPFKSLDNKTWIANATQSLTNLIQCKDLNLHVDGIDVLYEQIDASPGDFIQCVGQLIKNLKENGVITEASISPTFNLNKEFYSRLYSSVSFLVDFVDYQFQKEVDFVMNPGVLLQRYNELTKVYPRRKLLAGYSAENEDWTTLSPIVFFLGGMDILKKRKAPGISIHYHNFYAQSSPQQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00434 267 Gene3D Glycosidases 3 266 - -
Vian11g00434 267 PANTHER CHITINASE 2-LIKE 4 258 - -
Vian11g00434 267 SUPERFAMILY (Trans)glycosidases 28 255 IPR017853 -
Vian11g00434 267 Pfam Glycosyl hydrolases family 18 63 232 IPR001223 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00434 - - gmx:100776259 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00434 11 4076250 4077053 Vian11g00434 11 4076250 4077053 ECH
Vian11g00434 11 4076250 4077053 Vian5g01250 5 35232807 35233730 PCT