Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00236 ATGGCGTCCATTGGTGCACTCAAATTCTTCCTTTACTTACTTCCATGTCTCCTCAACTATCTACCTCATTCTCAAGGTAAGCAGAATTGGAATGGTGAGTACCCATTTATCAGGAGAGGAAGTTCATTGGGGCGTTCGGACAATGGTGGTTATGACTATATAATAGTGGGAGGTGGCACTGCAGGGTGTCCATTGGCTGCAACGCTGTCTAAGAAATTCAAAGTTCTGGTGCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCCAATGTGACATTTCTGCGAAACTTTCACATAACTTTGGCAGACACTTCACCAACTTCGGCTTCTCAGTACTTCATTTCAACAGACGGAGTGCTGAATGCAAGAGGAAGGGTTTTGGGAGGTGGCAGTTCCATTAACGCTGGCTTCTACACTCGAGCAAACCCTAGATTTATAAGGAAGGTGGGGTGGGATACAAAGCTAGTGAACGAGTCTTATCCTTGGGTGGAGAAGCAGGTTGTTCATCGTCCAAAGTTTTCACATTGGCAGAGAGCAGTCAGGGACGGGCTTCTAGATGCTGGTGTGTCACCTTTTAATGGATTCACCTATGATCATAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGCCACACCGCTGCTGAGTTGCTCGCTTCTGGGAATCCTAAGAAACTTACTGTCCTCGTCCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAAAACCAAAAGCCATTGGGGTGATTTTCAAGGATGAAAATGGGAAGCAGCATCAGGCATTTCTGGGACCTGGGAGGAAGAGTGAAGTGATTGTGTCTAGTGGGGCAATTGGCACTCCTCAATTGCTACTGCTCAGTGGAATTGGCCCCAGAGAAGAGCTTCAGAAATTCAACATCCCTGTAGTGCTTCACAATGAATTTGTCGGTAAAGGCATGGCTGATAACCCCATGAACACAATTTTCGTTCCTTCCAAGAGACCAGTTCAACAGTCACTCATAGAAACTGTCGGTATAACCAATCTGGGTGTGTACATTGAGACTAGTTGTGGCTTTGGTCAGTCCAAAGACAGCATTCACTGTCACCATGGTATCTTGTCAGCTGAGATTGGGCAGCTGTCGACAATTCCACCAAAGCAAAGATCACGAGAAGCTGTTGAGGCCTTTGTGAAGAGCAAGAAAGACATACCAATCGAAGCATTCAGGGGAGGGTTCATACTGTCAAAAGTTGCGAGTCCTTGGTCAACAGGTGAACTGAGGTTGATAAACACCAACGTGGAGGAGAACCCTGCTGTTACCTTCAACTATTTCAGCCACCCTCATGATCTTAAGCGCTGCGTGGAGGGTATCCGCTTAGCCATAAAGGTTGTTCAGTCACAGCACGTCACAAACTACACTATGTGTGACAGACAAAGCGCAGAGAAAATGTTGAACATCAGTGTGCAGGCAAATATCAACCTCATACCCAAACATCCCAATGACACAAAGTCACTGGAACAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAAGTAGTAAACTCTGAGTATAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCCACATTTTCTGAGTCCCCAGGAACCAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTCTAAGAGACAGGTTGGGGAAATTGGGTGATATTTAA 1749 0.4603 MASIGALKFFLYLLPCLLNYLPHSQGKQNWNGEYPFIRRGSSLGRSDNGGYDYIIVGGGTAGCPLAATLSKKFKVLVLERGGVPFNNPNVTFLRNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRANPRFIRKVGWDTKLVNESYPWVEKQVVHRPKFSHWQRAVRDGLLDAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASGNPKKLTVLVHATVQKIVFDTTGKKPKAIGVIFKDENGKQHQAFLGPGRKSEVIVSSGAIGTPQLLLLSGIGPREELQKFNIPVVLHNEFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSCGFGQSKDSIHCHHGILSAEIGQLSTIPPKQRSREAVEAFVKSKKDIPIEAFRGGFILSKVASPWSTGELRLINTNVEENPAVTFNYFSHPHDLKRCVEGIRLAIKVVQSQHVTNYTMCDRQSAEKMLNISVQANINLIPKHPNDTKSLEQFCRDSVITIWHYHGGCHVGKVVNSEYKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLGDI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00236 582 Gene3D - 168 514 - -
Vian11g00236 582 PANTHER OSJNBA0019K04.7 PROTEIN 30 576 - -
Vian11g00236 582 Pfam GMC oxidoreductase 419 565 IPR007867 GO:0016614
Vian11g00236 582 ProSitePatterns GMC oxidoreductases signature 2. 282 296 IPR000172 GO:0016614|GO:0050660
Vian11g00236 582 Pfam GMC oxidoreductase 51 323 IPR000172 GO:0016614|GO:0050660
Vian11g00236 582 SUPERFAMILY FAD/NAD(P)-binding domain 51 574 IPR036188 -
Vian11g00236 582 Gene3D - 51 564 IPR036188 -
Vian11g00236 582 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 521 - -
Vian11g00236 582 PIRSF Alcohol_oxidase 37 581 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00236 Vian-Chr11 2294456 2300166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00236 7 580 Miscellaneous Gene Families AT3G56060 48.616 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00236 K15403 - gmx:100784433 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00236 11 2294456 2300166 Vian11g00236 11 2294456 2300166 ECH
Vian11g00236 11 2294456 2300166 Vian9g00260 9 2351743 2357309 PCT