Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00234 ATGGATGCATTTAAAGGAAGGCATGTTTTTACAACTCCCATCTATCTCTTAGACCTTGCACATTTAGCAAAGTGGTCTCAAACAACCAAAGGAATTTGGATGGCTAAATGTGTTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAGCGTGGAGAGGATGACACTGCATTTGAAAAGCAGAGTGCTTTATTTGCTTTGGCTATTTCTGATATTGTGCTAATAAACATGTGGTGCCATGACATTGGCCGCGAACAAGCTGCAAATAAGCCTCTTTTAAAAACTGTGTTTCAGACACCGCTTGAAAATTTAGAGCCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCAGAGGCCCATAAGGAAACCCCATTAAGTGATTTTTTCATTGTTGCCAGCTTGAGGAAACGATTCCAGCATTCTATCGCTCCAGGTGGCCTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCTGGCTTTTCTTTTAGTGCTCAGGAAATCTGGAAAATCATTAAGGAGAATAAGGATCTCGACCTTCCCGCACACAAGGTCATGGTTGCTACTGTTCGATGTGAAGAAATTGCTAATGAGAAATATGACCTTCTTGTTTCAAATAAGCTTGTCCAACCAGCATTCCAAAGTGCGCTAGGACATGTAAGGTCCAAAGCGTTTGATAAGTTCAAGGCAGCATTTGACAAGGCTTTGAATGGAGGGGAAGCGTTTTCTTCTGCTGCTAATACATGCGTGGAGTCTTGTATGGCTAAGTTTGATGAAGGATGTGCAGATGTTGTCATTGAAATAGCTGACTGGGATACATCTAAAGTGAGGGAGAAGCTGCGGCGTGATGTTGATGCACATGTCTCATCTGTCCGTGCATCTAAGATATCAGAACTAGTTTCATCATATGAGGAAAAACTGAAGGAGGCATTATCTGCACCTGTTGAAACTCTATTGGATGGAGCTAATAATGATACTTGGTCATCGATAAGGAAACTTCTTAATCGTGAGACTCTATCAGCTGTTTCTGGGTTCTCTGCAGAACTTGACAGATATGATATGGATGAAGAAACAAAAAAGAGCATGATTGTGACTTTAGAGGATTATGCAAAGGGTGTGATAGAAGCCAGGGCTAGGGAAGAGGCTAGCAGAGTTCTAATCCGTATGAAGGACAGGTTTATGACATTGTTTAGTCATGATTCTGATTCAATGCCTCGTATTTGGACGGGTAAAGAAGATATTCGAGCCATCACAAAGTCTTCCCGCTCTGAATGCTTGAAGTTGCTGTCTGTAATGGCTGTACTTCGTTTGGCTGATGCTGATGATATTTATGATATAGAGAAAACATTAACAGTCGCATTGGCAGATTCATCAAGCGATTCTGGTAAAGATAAGAGCATCACGACACTCGATCCACTGGCTTCAAGCACTTGGGAGCAGGAAGCCAACAATCGTAGCAACAATTGGTTACCTCCACCATGGGCAATTGTTGCTCTGCTTATTCTTGGATTTAATGAATTTATGACAATTTTAAGAAATCCCTTGTATATAGGTGTCATCTTTGTTGGCTATCTTCTCATGAAATCCCTATGGGTGCAGCTTGACGTTGCGGGAGAATTTCAAAATGGAGCTCTTCCAGGAATCATCTCCTTGTCTAGCAAGTTTATTCCAGTTATCATGAACCTTGTGAGAAAACTAGCAGAGGAGGCACAGAATGCTGCAGCCGGTGACCATAGTGGAAATTCATCAAAACGCTATGAGAGGCCTGTTCCTTCTGGTAGAGTTACATCATCGAGTTCTTCTTCTCGTCTGACTTCTTTGGGTAATCGAACTGACTCAACCGAGTCTATCAGTCCATTAAAAGAAGAGTAG 1902 0.4227 MDAFKGRHVFTTPIYLLDLAHLAKWSQTTKGIWMAKCVGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQTPLENLEPVLREDIQKIWDSVPKPEAHKETPLSDFFIVASLRKRFQHSIAPGGLAGDRRGVVPASGFSFSAQEIWKIIKENKDLDLPAHKVMVATVRCEEIANEKYDLLVSNKLVQPAFQSALGHVRSKAFDKFKAAFDKALNGGEAFSSAANTCVESCMAKFDEGCADVVIEIADWDTSKVREKLRRDVDAHVSSVRASKISELVSSYEEKLKEALSAPVETLLDGANNDTWSSIRKLLNRETLSAVSGFSAELDRYDMDEETKKSMIVTLEDYAKGVIEARAREEASRVLIRMKDRFMTLFSHDSDSMPRIWTGKEDIRAITKSSRSECLKLLSVMAVLRLADADDIYDIEKTLTVALADSSSDSGKDKSITTLDPLASSTWEQEANNRSNNWLPPPWAIVALLILGFNEFMTILRNPLYIGVIFVGYLLMKSLWVQLDVAGEFQNGALPGIISLSSKFIPVIMNLVRKLAEEAQNAAAGDHSGNSSKRYERPVPSGRVTSSSSSSRLTSLGNRTDSTESISPLKEE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00234 633 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 1 122 IPR030386 GO:0005525
Vian11g00234 633 MobiDBLite consensus disorder prediction 583 633 - -
Vian11g00234 633 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 142 191 - -
Vian11g00234 633 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 10 104 - -
Vian11g00234 633 Gene3D - 15 127 IPR027417 -
Vian11g00234 633 MobiDBLite consensus disorder prediction 602 625 - -
Vian11g00234 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 106 IPR027417 -
Vian11g00234 633 PANTHER PROTEIN SEY1 490 594 IPR008803 -
Vian11g00234 633 Pfam Sey1 three-helix bundle domain 496 579 IPR046758 -
Vian11g00234 633 Pfam Sey1 three-helix bundle domain 216 494 IPR046758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00234 Vian-Chr11 2274211 2282466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00234 K22698 - gmx:100797516 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00234 11 2274211 2282466 Vian9g00259 9 2331146 2345857 PCT