Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00654 ATGGCTTCTACTCATGCACTCAATTCCTCTGCATTAATACCTTTCTGTCTCATCCTTATCATTTCCACTAATGCCGCTGCCATCACTGCACATCAACAACAACACTTCAAACAAGCACCCAAATTCTACAACTCCCCCACCTGTGCCACCACTGCCCTCGAACACACCCACACCTGTTCGGACGACGCAGTTCACGTTGCCATGACACTGGATATCACCTACCTCCGGGGCTCCATGGCGGCCATCCTCTCCGTCCTCCAGCACTCCTCCTGTCCAGAAAACGTCGTCTTCCACTTCGTCACCGCCGCCTCCAGGACCTCCTCCTCCGCCCTCCTTAATCGCACCCTCTCCAATTCCTTCCCTTATCTCAATTTCCAAATCTACCCCTTCAACGACCTCCAAGTTGCCGGCCTCATCTCCACCTCCATCCGCTCCGCTCTCGATTGCCCCCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTCCCCTCCTGCGTCCGCAAAATCGTCTACCTCGACTCCGACCTCGTCCTCGTCGACGACATCGCCAAACTGGCGGCCACGCCACTCGGAGACCACAACAGCAACAACACCGTCCTCGCCGCCCCCGAATACTGCAACGCCAACTTCAGCGCTTACTTCACCCCCTCCTTCTGGTCCAACCCCTCTCTCTCCCTCACCTTCGCGGGCCGAAGGCCCTGCTACTTCAACACCGGCGTCATGGTGATTGATTTGCAACGCTGGCGGGCCGGCGACTACACCAGGAAGATCGAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTGGGCTCCCTTCCGCCGTTTCTACTCGTTTTCGCTGGCAACATAGGCCCGGTGGATCACAGGTGGAACCAGCATGGGCTTGGCGGGGATAACTTCCGCGGCCTCTGCAGAGACTTGCATCCAGGCCCGGTGAGCCTCCTGCATTGGAGTGGGAAGGGAAAACCCTGGGCCCGCCTCGACGCCAACCGCCCTTGCCCCTTGGATGCCCTGTGGGCTCCCTACGATCTTCTCCAAACTCCTTTCGCTCTCGAAGCCTAG 1071 0.5845 MASTHALNSSALIPFCLILIISTNAAAITAHQQQHFKQAPKFYNSPTCATTALEHTHTCSDDAVHVAMTLDITYLRGSMAAILSVLQHSSCPENVVFHFVTAASRTSSSALLNRTLSNSFPYLNFQIYPFNDLQVAGLISTSIRSALDCPLNYARNYLANLLPSCVRKIVYLDSDLVLVDDIAKLAATPLGDHNSNNTVLAAPEYCNANFSAYFTPSFWSNPSLSLTFAGRRPCYFNTGVMVIDLQRWRAGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFALEA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00654 356 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 16 349 - -
Vian10g00654 356 FunFam Hexosyltransferase 65 336 - -
Vian10g00654 356 Pfam Glycosyl transferase family 8 65 329 IPR002495 GO:0016757
Vian10g00654 356 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 347 IPR029044 -
Vian10g00654 356 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 336 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00654 Vian-Chr10 6309454 6310524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00654 34 354 Glycosyltransferase AT3G50760 71.605 2.03e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00654 K20893 - gmx:100783054 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00654 10 6309454 6310524 Vian10g00654 10 6309454 6310524 ECH
Vian1g01744 1 20307104 20308141 Vian10g00654 10 6309454 6310524 ECH
Vian10g00654 10 6309454 6310524 Vian1g01744 1 20307104 20308141 PCT