Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00653 ATGGCTCCCTCGTACTGCGTGAAGGAGAGCAAACCCTGCGTCGGTTGGGTTCAGCGTTACTTGGATGATTGTCTCTGCGATCTTAAAGATGAAATCTCCTTTTCCTTGGGCTTCATCAGTCTCATATGCTGGGGAGTAGCAGAAATTCCTCAGATTATCACCAACTTTCGAGCTAAGTCTAGCCATGGTGTCTCCCTAGCCTTTCTCCTCACTTGGGTCGCTGGCGACATGTTCAATCTCGTTGGTTGTGTTCTGGAGCCTGCCACGCTTTACACAATCACTACGATCGTGCTAGTACTTCAAAGCCTCTATTATGACTACATCTATAAATGGAACAAGCGTCGTCGAAATATCAACATCGACGAGGCCCAGGAAGAAGAGAAAAAACCTTTGAGACCCAAACCAGGGCCACAGTCAGGGATTGCAATACCAAATGACGAACCCAAATCAACGCCCCGACGGGAATACTACTATAGGTCAGCCAGATCTCTGGCCGGTAATGATACTCCACCATTTGGTACCTACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCCATGGAAATGAACAATGATTCATCCTCTGATGATGAGTCACCTCCGCTTTCTTCCACCAAGCCTGTAACACAGCCTAGACCCATCCCTCGATCTGTCCCTGCAAGCTATGGAACATTTCTAGCAGCATCTATGAACTTGCCCCGGCAGGGTAATGCTTTGAAGGAGGGATACATAAGATTCAACGGAAGAAAGCTACTCTTGCAGATAATTTTGCAGTACGCCAACTATAGATACATTCGGAAGAAAGCAAGAAGTGATGATTCTGATTACGGGAACTACGAGGAAGACAACAAAAGATTCGTGTCTTGA 864 0.4664 MAPSYCVKESKPCVGWVQRYLDDCLCDLKDEISFSLGFISLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDMFNLVGCVLEPATLYTITTIVLVLQSLYYDYIYKWNKRRRNINIDEAQEEEKKPLRPKPGPQSGIAIPNDEPKSTPRREYYYRSARSLAGNDTPPFGTYLRAAKSVPSAMEMNNDSSSDDESPPLSSTKPVTQPRPIPRSVPASYGTFLAASMNLPRQGNALKEGYIRFNGRKLLLQIILQYANYRYIRKKARSDDSDYGNYEEDNKRFVS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00653 287 MobiDBLite consensus disorder prediction 122 152 - -
Vian10g00653 287 Gene3D - 35 126 - -
Vian10g00653 287 SMART ctns 46 77 IPR006603 -
Vian10g00653 287 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 249 - -
Vian10g00653 287 MobiDBLite consensus disorder prediction 185 204 - -
Vian10g00653 287 MobiDBLite consensus disorder prediction 185 216 - -
Vian10g00653 287 Pfam PQ loop repeat 32 87 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00653 Vian-Chr10 6301435 6304706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00653 K23678 - gmx:100815310 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00653 10 6301435 6304706 Vian10g00653 10 6301435 6304706 ECH
Vian10g00653 10 6301435 6304706 Vian1g01742 1 20293837 20297238 PCT