Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00366 ATGAGCACCGGCGACCTTCTCAGCATCGAACCTCTTGAACTGAAGTTCATATTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTAGCATTCAAGGTGAAAACGACCAATCCAAAGAAATACTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCTACATGCGATGTTATCGTTACCATGCAAGCGCAAAAGGAAGCTCCGGCTGACATGCAATGCAAGGATAAGTTTCTTCTTCAAAGCGTAAGAGTAGAGGATGGAATCGCCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCACGTGGTTGAGGAGTGCAAATTGAGAGTGTTGTATGTCTCTCCGCCTCAACCTCCGTCTCCAGTCCCGGAAGGTTCCGAGGAAGGATCATCACCTAGAGGTTCTGTTTCCGACAATGGAAATATCAGTGGTGCTGACTCCGCTGCAGTAACAAGAGCATTTGCTGAACGACATGATGGTCCAGAAAAGTCTGTAGAGGCAAAAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCTATCCAACAAAATAACAAGCTTCGTCAGGAACTGGACATGCTGAGACGGGAAAGCAACAAAAGTCGTGGGGGTGTCTCGATGGTCATTGTCATATTAATTGGCTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4518 MSTGDLLSIEPLELKFIFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVRVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNISGADSAAVTRAFAERHDGPEKSVEAKALISRLTEEKNNAIQQNNKLRQELDMLRRESNKSRGGVSMVIVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00366 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Vian10g00366 241 MobiDBLite consensus disorder prediction 127 155 - -
Vian10g00366 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Vian10g00366 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Vian10g00366 241 Coils Coil 177 211 - -
Vian10g00366 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Vian10g00366 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Vian10g00366 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Vian10g00366 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00366 Vian-Chr10 3282305 3286784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00366 - - gmx:100791280 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00366 10 3282305 3286784 Vian10g00366 10 3282305 3286784 ECH
Vian10g00366 10 3282305 3286784 Vian1g01402 1 15376183 15378480 PCT
Vian1g01406 1 15412574 15414576 Vian10g00366 10 3282305 3286784 PCT