Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00358 ATGCGAGTGAAAGAGATGCACCAACTGTGTTGTATCTCTCTGGAGAGTCCTGGAATCGGCAACCATTCCCCGGAGCGGATGGCGGCGAGACTTTTTCAAACGAGGAGCTTCCCGGCGGTGGGATCTCTGGGCAATGCTGCTCAAAGATGGGAGACCACGGTGGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGATGGTTCCTCCTCAGGAACGGTGTTCTCTCTTATGCCAAGATCAGATGTCCGGAGAATCTCAACCTCCTCACTTCTTCTGACGACATTAGCTTCATAGGGGAGATTTCCACCAACCGACTCGCACGAGTGGACAGAGTTGCCCCCGCCACACGACGAAAACACCGCAAAGCTTCTTCCTCTTCCCGTGTAGTCCATCTCAAGATTTCATCATTTAGAGAGAGCAAGTCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAAACTCTCCATCTGAGAACTGATTCGAGGAATGATCGGGTTGCGTGGATACAGGCATTGGTTTCGACACGTGGCCTGTATCCTCATCAAGCCCTCAATGATCATCTCTTGCTTACACCCAATGATATATCCGTGTCAACCGACAGGCTTAAGTTACGCTTGCTTGAAGAGGGTACCAGTGAGAACCTTGTAAAGGAGTGCGAGCAAATCATGCTCTCAGAGTTCTCCGAAATGCAAGGACAACTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTTGATACAATAAGGCAATTGGAGGCAGCTAATACTGAACCTGAGGCCACTGCAATACACGATGGTGAATACCAGTTAACAAAGAACGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAAGTATCAGATGAAGATGAAATCTCATATTATGATACTAGAGATTGTTTTACGGAGCCTGATTGCAAGTGTGAGTCAGAAAGAGCTATAAATGAAGTGGACAGGTGTAGGGAAGCCAGCACGCAATGCACTGATACAGAGAACATTTATCCCGAGAAAATGGTCTGTAATTATAAGCACCCTCAGATAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAACGTGGGAAAAGATCTCACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCTATATCTTCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTACTGGATCTAGCTCACGAGTACGGAAAATCAGGAAACGGTCTTCTTCGGGCACTGTATGTTGCTGCCTTTGCAGTTTCGGGTTATGCGTCATCTGAAGGTCGTAACTGTAAACCCTTTAATCCTTTACTGGGTGAAACCTACGAAGCTGATTACCCCGAGAAAGGAATTCGCTTCTTTTCAGAGAAGGTCAGCCATCATCCAACACTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTCGGGGAAGGTCAATTCAGCTTGATCCAGTAGGTGTTCTGACCCTAGAGTTCAATGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTCATCCTTGGGAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGCAATCGGAAGTATTCGTGCAGACTCAAGTTCAAAGAGCAGACGATACTCGACCGAAATCCTCGCCAAGTACATGGATTTGTGGAAGATGTAACGGGGAAAAAGGTTGCGACATTGTTTGGGAAGTGGGATGACAGCATGTACTATATGAGTGGTAATGTAAATGTGAAGCCTAAAGATTTGAATTCACCAAACGCATCTTTGTTGTGGAAAAGGACGATGGAATCTCCTAATGTGACACGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAATCTCCCGCCTACGGATTCCAGGCTTAGACCTGATCAACGGCATCTAGAGAATGGGGAATACGACAAGGCTAATTTGGAGAAACAAAGGCTGGAAAAGCGTCAGAGAATGTCAAGGAAAATACAAGAAAATGGTTGGAAGCCTAGGTGGTTCCGAAGAGAAGGTGAAAGTGGAACCTTTCGATACATTGGTGGATACTGGGAAGCGAGAGAGCTTCGAAGCTGGGACGGATGCCCTGATATATTTAGTGAAATCAATGAAGAGTCTGCCGATTCATTTGGTGCATTTTAA 2301 0.4533 MRVKEMHQLCCISLESPGIGNHSPERMAARLFQTRSFPAVGSLGNAAQRWETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTSSDDISFIGEISTNRLARVDRVAPATRRKHRKASSSSRVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRNDRVAWIQALVSTRGLYPHQALNDHLLLTPNDISVSTDRLKLRLLEEGTSENLVKECEQIMLSEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEATAIHDGEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRDCFTEPDCKCESERAINEVDRCREASTQCTDTENIYPEKMVCNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDLAHEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFRGRSIQLDPVGVLTLEFNDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRKYSCRLKFKEQTILDRNPRQVHGFVEDVTGKKVATLFGKWDDSMYYMSGNVNVKPKDLNSPNASLLWKRTMESPNVTRYNLTPFAITLNELTPGLKENLPPTDSRLRPDQRHLENGEYDKANLEKQRLEKRQRMSRKIQENGWKPRWFRREGESGTFRYIGGYWEARELRSWDGCPDIFSEINEESADSFGAF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00358 766 Gene3D - 473 641 - -
Vian10g00358 766 ProSiteProfiles PH domain profile. 51 183 IPR001849 -
Vian10g00358 766 Coils Coil 684 713 - -
Vian10g00358 766 FunFam oxysterol-binding protein-related protein 1D isoform X1 473 644 - -
Vian10g00358 766 Pfam Oxysterol-binding protein 387 741 IPR000648 GO:0008289
Vian10g00358 766 Gene3D - 683 744 - -
Vian10g00358 766 Pfam Pleckstrin homology domain 56 178 - -
Vian10g00358 766 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 740 IPR000648 GO:0008289
Vian10g00358 766 Gene3D - 48 183 IPR011993 -
Vian10g00358 766 Coils Coil 240 260 - -
Vian10g00358 766 SMART PH_update 52 185 IPR001849 -
Vian10g00358 766 SUPERFAMILY Oxysterol-binding protein-like 382 755 IPR037239 -
Vian10g00358 766 FunFam Oxysterol-binding protein-related protein 2A 683 754 - -
Vian10g00358 766 SUPERFAMILY PH domain-like 53 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00358 Vian-Chr10 3221690 3230035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00358 K20456 - gmx:100819924 1426.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00358 10 3221690 3230035 Vian10g00358 10 3221690 3230035 ECH
Vian10g00358 10 3221690 3230035 Vian1g01389 1 15232988 15242521 PCT