Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00285 ATGGCGAAGGTTTACCCTGATCAGGAGGAACCCACTTTCTCTTCCTGCCCCTCCCACGGACCACACACATATACCCTCTGGATGAAATCACTCGTTTTCAACTCTAACGGTTGCACCGTCTACGATTCCAACGGTCTCATCGTTTATCGCGTTGATAACTACGACACAAAGGGTAGAAGAGACGTTAACCTTTTGGATCTCCGAGGAAGAGTCCTCTGCACCATACACAAGAGACTGTTCGGTTTTGGACGTTGGGATGTTTCCAGAAGTAGCTATGACAGTAGTAACAGTGAAAACCAGGAAAAGCCTTGGTTTCATGTTAAAAGATGCCATGAGATGATGACAGGAAAATTGACGTGCCAGATTAGTACGGTGGAGTGTCAGAAGTACTGCATAGAGAAAATCGGTGCCAAAACAGCGTTTCGGATTGTCAACACAGATGATGGAGACATAGTTGCCCATGCGAAGCAAAAGCACTCGACCTCGGGAGTGATACTGGGCAGTGATGTTCTAACGTTGGATGTTGAAGGTGGAATTGATCATTCTCTAGTAATGGCTTTTGTCACAGTGTTTGGATTAATCTGCGGCAGAATGTGA 597 0.459 MAKVYPDQEEPTFSSCPSHGPHTYTLWMKSLVFNSNGCTVYDSNGLIVYRVDNYDTKGRRDVNLLDLRGRVLCTIHKRLFGFGRWDVSRSSYDSSNSENQEKPWFHVKRCHEMMTGKLTCQISTVECQKYCIEKIGAKTAFRIVNTDDGDIVAHAKQKHSTSGVILGSDVLTLDVEGGIDHSLVMAFVTVFGLICGRM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00285 198 SUPERFAMILY Tubby C-terminal domain-like 17 195 IPR025659 -
Vian10g00285 198 PANTHER - 21 195 IPR007612 -
Vian10g00285 198 Pfam LURP-one-related 20 190 IPR007612 -
Vian10g00285 198 Gene3D - 15 197 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00285 Vian-Chr10 2622317 2623060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00285 - - gmx:100815833 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00285 10 2622317 2623060 Vian1g03810 1 61179961 61180801 PCT