Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00271 ATGGTGAATCGTCGACGCTTTATTCGAGTTGCAGTGAGCGACGATGAAGATGAAGCATCACGTCCACGACGAACGCGGAAAAGATTGAGGCTTTTTGAGGAAGAGGAAGACGACGATAATGATAACAAGAACGAAGAACAACCACTGCAGAAAAAAGAAGAAGTTCCAGAATCGCCTCAGCCTGCGGAGGATGCTACTCCTATTGGTAAACCAATTAGGTTTTCGGGAAAAGGAAAAGGCAAGAGAAGTCACTACGAGTCCTTCATGTTCAATGGCGTCGAATATACTCTTGAGGATTCTGTTTTTTTCTTTCCCGAGGAAAAAGGCCAAAAGCCATATGCTGCAATTATTAAGGACATTAAACAAGGAAGTGATGGTAATGTGATAGTGACGGGACAATGGTTTTATCGTCCTGAAGAAGCTGAGAAAAAAGGTGGCGGGAACTGGAAATTACATGATACAAGGGAGTTATTTTACAGTTTCCATCGTGATGATGTTCCTGCTGAGGCTATCATGCACAAGTGTGTGGTGCATTTTGCTCCCATACATAAACAACTTCCAAAACGTAAGGATCACCCTGGATTTATTGTACAAAAGGTATATGACAATGTGGGAAAAAAACTTTGGAGATTGGATGATAAAGTTTATGGGGATACTAAGCAGCGAGAGATTGATGTGCTTATTCATAAGACTCTACAACTTATTGGTGAACTACCTCGTATTGAGTTCGTGGAAACCACTGATGATGCGCATGACCAAATGAAAAGTGAAAAAGTTTGA 780 0.4128 MVNRRRFIRVAVSDDEDEASRPRRTRKRLRLFEEEEDDDNDNKNEEQPLQKKEEVPESPQPAEDATPIGKPIRFSGKGKGKRSHYESFMFNGVEYTLEDSVFFFPEEKGQKPYAAIIKDIKQGSDGNVIVTGQWFYRPEEAEKKGGGNWKLHDTRELFYSFHRDDVPAEAIMHKCVVHFAPIHKQLPKRKDHPGFIVQKVYDNVGKKLWRLDDKVYGDTKQREIDVLIHKTLQLIGELPRIEFVETTDDAHDQMKSEKV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00271 259 ProSiteProfiles BAH domain profile. 93 212 IPR001025 GO:0003682
Vian10g00271 259 SMART BAH_4 93 212 IPR001025 GO:0003682
Vian10g00271 259 MobiDBLite consensus disorder prediction 1 81 - -
Vian10g00271 259 MobiDBLite consensus disorder prediction 44 59 - -
Vian10g00271 259 Pfam BAH domain 93 208 IPR001025 GO:0003682
Vian10g00271 259 MobiDBLite consensus disorder prediction 8 34 - -
Vian10g00271 259 Gene3D - 3 194 IPR043151 -
Vian10g00271 259 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00271 Vian-Chr10 2504188 2505250 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00271 - - var:108334753 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00271 10 2504188 2505250 Vian1g03825 1 61290077 61297280 PCT