Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04311 ATGAGGTGGTTGGTTGAAGGCTGTCAACCAGGGGATTCATTGGTGCTTCACTTCTCAGGACATGGATCAAGGGAAGTGGACCATAGCATGGATGAGGTTGATGGGTATGATGAAGCTATATGCCCTGTTGATTATGAGAGTGAGGGGAAGATTCTCGACGATGAAATCAACGCTACAATTGTTAGGCCTCTACCTCATGGTGCCAAACTTCATGCTGTCATTGATACATGCTTTAGTGGGACAGTTCTTGATTTACCATTTATGTGCAGGATTAACAGAAAAGGTTATTATGGATGGGAAGATCATAGACACCCCAGAGCTGGCTACAAAGGCACAAGAGGTGGCCTAGCAGTTTGCATTTCAGCTTGTGATGATGATGGAAGTGCAGCAGAGACATCGGCCTTTAGCGGTATGGAAAGTGCTGTGCTGGTGCCTTGA 438 0.4612 MRWLVEGCQPGDSLVLHFSGHGSREVDHSMDEVDGYDEAICPVDYESEGKILDDEINATIVRPLPHGAKLHAVIDTCFSGTVLDLPFMCRINRKGYYGWEDHRHPRAGYKGTRGGLAVCISACDDDGSAAETSAFSGMESAVLVP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04311 145 Pfam Caspase domain 1 135 - -
Tsu08g04311 145 Gene3D - 1 143 - -
Tsu08g04311 145 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 1 141 - -
Tsu08g04311 145 PANTHER METACASPASE-4 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04311 Tsu-Chr8 61059358 61060101 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04311 K22684 - gmx:100779288 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04311 08 61059358 61060101 Tsu08g04311 08 61059358 61060101 ECH
Tsu02g01597 02 14024142 14026140 Tsu08g04311 08 61059358 61060101 PCT