Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04278 ATGGGAGATTCTTCTTCAGAGAAGACGAAGTCAGAAGCAGTTAAGATAATCGaatcatttcaaattcttccaaAACTCGTCGTTTTCGATCTCGATTACACTCTCTGGCCATTCTACTGCGAATGTCGATCCAAGCGCGAAACACCTTCTCTTTATCCTCACGCCATGGGAATCTTGTTAGCTCTCAAACACAAAGGAATTGATATTGCAATCGCTTCTCGATCTCCAACTGCAGATATTGCTAAAGCTTTTCTCAATAAATTAGGAATCACTTCATTCTTCGTTGCTCAGGAAATATATTCGAGTTGGAGTCATAAAACAGATCATTTTCAGAGAATTCATTCAACTACTGGAATTCCGTTTAACTCTATGCtcttttttgatgatgaaaataGGAATATTCAAGCgGTCTCTAAAATGGGAGTGACTAGCATTTTGGTTGATGATGGGGTAAATCTTGGAGCCTTATCTCAAGGTCTTACACAGTTTTCTCGTAATTGGAATACATCACAGAAGAACAAGCAGAAATGGCTGTCCAACTATTCTCAGAAGCCAGATACTTCCAACTCTGCACCATCAAATTCAACGTCCAAGTAA 597 0.3719 MGDSSSEKTKSEAVKIIESFQILPKLVVFDLDYTLWPFYCECRSKRETPSLYPHAMGILLALKHKGIDIAIASRSPTADIAKAFLNKLGITSFFVAQEIYSSWSHKTDHFQRIHSTTGIPFNSMLFFDDENRNIQAVSKMGVTSILVDDGVNLGALSQGLTQFSRNWNTSQKNKQKWLSNYSQKPDTSNSAPSNSTSK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04278 198 Gene3D - 2 169 IPR023214 -
Tsu08g04278 198 SFLD C1.5.2: MDP Like 5 171 - -
Tsu08g04278 198 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 7 180 IPR010036 GO:0016791
Tsu08g04278 198 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1-LIKE 7 180 - -
Tsu08g04278 198 SUPERFAMILY HAD-like 24 157 IPR036412 -
Tsu08g04278 198 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 171 - -
Tsu08g04278 198 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 25 140 IPR010033 -
Tsu08g04278 198 Pfam Acid Phosphatase 23 165 IPR010036 GO:0016791
Tsu08g04278 198 MobiDBLite consensus disorder prediction 174 198 - -
Tsu08g04278 198 CDD HAD_MDP-1_like 24 147 IPR035679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04278 Tsu-Chr8 60737913 60739876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04278 K17619 - gmx:100305763 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04278 08 60737913 60739876 Tsu08g04278 08 60737913 60739876 ECH
Tsu02g01636 02 14423224 14426056 Tsu08g04278 08 60737913 60739876 PCT