Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01636 atggAGGACCTGGAGAGTGTGAGGGCTGAAGCTGTGCAAATGATGGGAGTGTTCCAAGTACTACCAAAGCTCGTAGTTTTCGATCTCGATTATACTATTTGGCCTTTCTACTGTGAGTGCCGATCCAAACACGATACTCCTTCTCTGTTTCCTCATTCAAGAGGCATCTTCACTGCACTCAAAGATCAAGGAATTCAAACTGCCATTGCTTCAAAATCACCAACTCCTCATATTGCAACCACGTTTCTTGACAAACTCAATATCACTTCAATGTTTGATGCCAAGGAAATATATTACACCTCGACGCACAAAACAGAACATTTTCAGAAAATTTATTCGAGAACCGGAGTCTCCTACAATTCTATGCTCTTTTTCGATGATGATAACAATAACATACAAGAGATTACAAAATTGGGAGTAACGAGTATTTTGGTTAGAAATGGTGTAAATCTTGGAATATTTAGAGAAGGCCTATCAAGATTTTCTCAAAATTGGGATGCATCAAAGAACAAGCAGAAAAGGCGCAAGTAA 531 0.3861 MEDLESVRAEAVQMMGVFQVLPKLVVFDLDYTIWPFYCECRSKHDTPSLFPHSRGIFTALKDQGIQTAIASKSPTPHIATTFLDKLNITSMFDAKEIYYTSTHKTEHFQKIYSRTGVSYNSMLFFDDDNNNIQEITKLGVTSILVRNGVNLGIFREGLSRFSQNWDASKNKQKRRK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01636 176 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 6 169 - -
Tsu02g01636 176 Coils Coil 168 176 - -
Tsu02g01636 176 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 23 137 IPR010033 -
Tsu02g01636 176 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 175 IPR010036 GO:0016791
Tsu02g01636 176 Pfam Acid Phosphatase 21 163 IPR010036 GO:0016791
Tsu02g01636 176 Gene3D - 6 166 IPR023214 -
Tsu02g01636 176 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE-LIKE PROTEIN 1 175 - -
Tsu02g01636 176 SUPERFAMILY HAD-like 22 153 IPR036412 -
Tsu02g01636 176 SFLD C1.5.2: MDP Like 6 169 - -
Tsu02g01636 176 CDD HAD_MDP-1_like 22 145 IPR035679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01636 Tsu-Chr2 14423224 14426056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01636 K17619 - gmx:100795199 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01636 02 14423224 14426056 Tsu08g04278 08 60737913 60739876 PCT