Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02793 ATGAAGACAGCAAAATTTTGGCGTCTAAGTATGGGTGATATGCAGATCTTGCCTGGATCTCGACATCGTCCTCCGATGAAAAAGCCAATGTGGATTGTTGTTCTGGTTTCATTTGTAATCATGTTTTTAACTTGTGCTTATATCTACCGGCTAAAAAACCGTACAGCTTGTAACATGTTCAATACTAGAGGATGCAATACTATTGATCATTGGTTTCCTCCTGTTCCCGCACGAGAATACACAGATGGTGAGATTGCAGCACATGTTGTTTTTAGAGATATTTTGAACTCCCCAATAGTTATGCCAGAAAATCCAAAAATCGCCTTCATGTTTTTGACGCCCGGTTCTCTACCATTTGAAAAATTGTGGGATAACTTCTTCCAAGGTCATGAAGGGAAGTTCTCCATTTATGTGCATGCATCAAAGAGTAAACCGGTTCATGTTAGTCGTTATTTTGTTAATCGAGATATACGCAGTGACCAGGTTGTATGGGGCAAAATGTCCATGGTTGATGCCGAGAGACGACTGCTGGCAAATGCTCTACAAGATCCTCAAAACATGCACTTTGTTTTACTTTCCGATAGCTGTGTGCCGCTTTAtaattttgactatattttcgATTATCTGATGTATACAAATATCAGCTTTGTGGACTGCTTTAAGGATCCTGGTCCTGTTGGCAATGGAAGGTATTCAGAACATATGCTACCTGAAGTTGAGATCAAGGACTTTAGAAAGGGTGCTcagTGGTTCTCTATGAAGCGGCAGCACGCTGTTATTGTTATGGCTGATCACATTTACTATTCAAAATTTCAAGGTCACTGTGAGCCTGGTGTGGATGGGAAGAATTGTATTCCCGATGAGCATTACTTACCGACCTTCTTCACGATTGTCGATCCTAGTGGAATTGCAAACTGGTCAGTAACTCATGTTGACTGGTCTGAGCAAAAATGGCATCCAAAATCATATAGGAATCAGGATATTACTTACGAGCTTTTGAAGAATATTACGTCCATTGATGAAAGTGTGCACGTTACAAGTGACGAGAAGAGAGAAGTACAAAGATGGCCTTGCTTATGGAATGGAGTTCAGAAGCCGTGTTACCTATTCGCTAGAAAATTCACTCCTGAAACAGAAGACAGTTTGTTGAAGCTTTTTTCCAATTATTCATCCGCTTGA 1179 0.3986 MKTAKFWRLSMGDMQILPGSRHRPPMKKPMWIVVLVSFVIMFLTCAYIYRLKNRTACNMFNTRGCNTIDHWFPPVPAREYTDGEIAAHVVFRDILNSPIVMPENPKIAFMFLTPGSLPFEKLWDNFFQGHEGKFSIYVHASKSKPVHVSRYFVNRDIRSDQVVWGKMSMVDAERRLLANALQDPQNMHFVLLSDSCVPLYNFDYIFDYLMYTNISFVDCFKDPGPVGNGRYSEHMLPEVEIKDFRKGAQWFSMKRQHAVIVMADHIYYSKFQGHCEPGVDGKNCIPDEHYLPTFFTIVDPSGIANWSVTHVDWSEQKWHPKSYRNQDITYELLKNITSIDESVHVTSDEKREVQRWPCLWNGVQKPCYLFARKFTPETEDSLLKLFSNYSSA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02793 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
Tsu08g02793 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 391 IPR044174 GO:0016757
Tsu08g02793 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02793 Tsu-Chr8 42912535 42916554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02793 - - gmx:100817202 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04584 04 53406864 53413656 Tsu08g02793 08 42912535 42916554 PCT