Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04584 ATGAAGTCAGAAAAGGGTTGGCGTTTAGGCAGTATGGGTGATATGCAGATATTACCCGGGTCTCGCCACCGTCCTCACATGAAGAAACCGACGTGGATTATTGTTTTGGTGTTATTCGTATGCGTTTTTTTAATCATTGCTTATATGTATCCACCACAAACTAGTTCAGCTTGTTACATTTTCTCTTCTAGAGGGTGCAAGACTTTTTCTGATTGGCTTCCACCTGTTCCTGCAAGAGAATATACTGATGAGGAGATTGCATCGCGGGTTGTTATTAAGGATATTTTGAACTCACCGCCGGTTATTGCAAAAATATCAAAGATTGCTTTTATGTTTTTGTCGCCAGGTTCTTTGCCTTTGGAAAAATTGTGGGACAATTTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCTTCCAAGACTAAACCAGTTCATGTGAGCCGTTACTTTGTCAATCGGGATATACGCAGCGATCAGGTGGTGTGGGGTAAAATTTCTATGGTTGATGCGGAGAGACGGATATTGGCGACTGCCCTCCAAGATCCTGATAACCAGCActttgttttactttctgaTAGCTGTGTGCCTCTATATCATTTTGACTATATTTACAACTATCTGATGCATACGAATATCAGCTATGTAGACTGCTTTAAGGATCCTGGTCCTCACGGGAATGGGAGGTACTCAGAGCGCATGTTACCTGAAGTTGAGGTGAAAGACTTTAGAAAGGGTGCACAGTGGTTTTCTATGAAGCGGCAGCACGCTGTTATAGTTATGGCTGATTACCTGTATTACTCAAAATTTCGGGCTTACTGCCAGCCTGGTCTGGAGGGTCGAAATTGCATTGCTGATGAGCATTACTTGCCAACCTTCTTCCAGATTGTTGATCCTGGTGGAATTGCAAACTGGTCAGTAACCCATGTTGACTGGTCTGAGAGAAAATGGCACCCAAAATCATATAGGGCTCATGATGTTACTTACGAGCTTTTGAAGAATATTACGTCCGTTGACGTCAGTGTACACGTCACCAGTGATGAGAAGAAAGAAGTACAAAGTTGGCCTTGCTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGGAAGTTCACTCCAGAAACACTGGACAAATTGTTGCATCTATTTTCCAATTATTCAACACCTTGGACTTGA 1188 0.4192 MKSEKGWRLGSMGDMQILPGSRHRPHMKKPTWIIVLVLFVCVFLIIAYMYPPQTSSACYIFSSRGCKTFSDWLPPVPAREYTDEEIASRVVIKDILNSPPVIAKISKIAFMFLSPGSLPLEKLWDNFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSDQVVWGKISMVDAERRILATALQDPDNQHFVLLSDSCVPLYHFDYIYNYLMHTNISYVDCFKDPGPHGNGRYSERMLPEVEVKDFRKGAQWFSMKRQHAVIVMADYLYYSKFRAYCQPGLEGRNCIADEHYLPTFFQIVDPGGIANWSVTHVDWSERKWHPKSYRAHDVTYELLKNITSVDVSVHVTSDEKKEVQSWPCLWNGIQKPCYLFARKFTPETLDKLLHLFSNYSTPWT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04584 395 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 8 392 - -
Tsu04g04584 395 Pfam Core-2/I-Branching enzyme 108 337 IPR003406 GO:0016020|GO:0016757
Tsu04g04584 395 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 8 392 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04584 Tsu-Chr4 53406864 53413656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04584 - - gmx:100817202 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04584 04 53406864 53413656 Tsu04g04584 04 53406864 53413656 ECH
Tsu04g04584 04 53406864 53413656 Tsu08g02793 08 42912535 42916554 PCT