Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02776 ATGGGGGGTTGTTTTTCTTCAAGATCATCATCCACATCAAAGAAAATTAGATTGGTTCATCTAAGTGGTTATGTAGAAGATTTTGAGCAACCAATTTCAGTTAACCAAGTAATCAATAGTAGAAATCCACCGACTCACTTTGTTTGTACCTCTCTTCAACTTCTTTCATCTTGTTCAAAACCATTGAAGGGTGATACACAACTTCAGCCTGGAAATGTTTACTTCATGTTACCTTATTCAATTCTACAAGCAGATGTTTCGCCTGTTGATTTGGCTTCGCTTGCAAAAAGGCTCACCGCAAAGGCGAAAACTAGTAGATTAGATGAcaaaaagtcattgaaaactacTAGTCCTTTATTAAACAACCAAGGTTTGAGTAATGTTTGGAGTTCGCCTTCGAGGAGTCCCGGAAGAGTTGCGGTGGCTGAACAATTCGCTATGACATACGGAGGACGAAGCAGCACAAGTAGAGCCCGGCTATGGAGACCTCTCTTGGATACTATTAGAGAGAAATCATTCAATAGGAGTAGTGAATCAGATTTGAGAGATATTCTTTGA 558 0.3835 MGGCFSSRSSSTSKKIRLVHLSGYVEDFEQPISVNQVINSRNPPTHFVCTSLQLLSSCSKPLKGDTQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTAKAKTSRLDDKKSLKTTSPLLNNQGLSNVWSSPSRSPGRVAVAEQFAMTYGGRSSTSRARLWRPLLDTIREKSFNRSSESDLRDIL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02776 185 Pfam PADRE domain 1 170 IPR025322 -
Tsu08g02776 185 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 181 - -
Tsu08g02776 185 PANTHER OS06G0700300 PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02776 Tsu-Chr8 42699391 42700185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02776 - - gmx:100810460 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04583 04 53401978 53403334 Tsu08g02776 08 42699391 42700185 PCT