Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04583 ATGGGAGTCTGTTATTCTTGCAATACACCTtctataatgaaaaataatatcaGAATTGTTCACCTTAACGGTTTTGTAGAAGAATTTGATCAACCAGTTTCAGCAAACCAAGTTATTGGAAACCCACCAAAACACTTTGTTTGTACCTCAATTCAGCTACTTTCATCATCCACAATACCATTGTTGAAAGGAGATAGTCAACTCCAACCTGGTCAACTATATTTCATGCTACCATATTCAATACTTCAAGATGGTTTTTCTCCTTTAGATTTGGCTTGCTTAGCTAAAAGACTCACTGCAAAAGCCAAAACAAAACCATGTGATTACAATAAGTTTTCAATATCTACTCCTTTATTGAATCAAACAGTTTTTTGGAATTCTCCTTCAAGGAGTCCTTGTAGAGTTGGTGTGGAAGAGAAAACTATGATGAATGGAGGAAGAAGTCCTTGTAGAATGCAGTCATGGAAACCTATCTTGGAAAATCTTCTGCGGCGCACGCTATTGAAGGATAGAGTTGGATCAAATAAATCTAAATCCTAA 540 0.3519 MGVCYSCNTPSIMKNNIRIVHLNGFVEEFDQPVSANQVIGNPPKHFVCTSIQLLSSSTIPLLKGDSQLQPGQLYFMLPYSILQDGFSPLDLACLAKRLTAKAKTKPCDYNKFSISTPLLNQTVFWNSPSRSPCRVGVEEKTMMNGGRSPCRMQSWKPILENLLRRTLLKDRVGSNKSKS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04583 179 PANTHER OS06G0700300 PROTEIN 1 168 - -
Tsu04g04583 179 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 168 - -
Tsu04g04583 179 Pfam PADRE domain 1 160 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04583 Tsu-Chr4 53401978 53403334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04583 - - cam:101506348 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04583 04 53401978 53403334 Tsu04g04583 04 53401978 53403334 ECH
Tsu04g04583 04 53401978 53403334 Tsu08g02776 08 42699391 42700185 PCT