Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02771 ATGGAAAACAAGGAAGAGGAAAAGGTTATGCTGACTAAGTCACTACTGCAACTGGTAAATGAATTAGATTCAGAAGAGGGTTACAAGATCCCTAATCTTGTGCAGCGCTTATTAAGTTTATTCAAAAATGTACGTCTAGGATCTGATATCACACACTTTCAGATGCCACCACTGTTTAACATACCAAAATCACAACTTCAATACACCGGTGAATCAGTGTACTGCAGTGCTTCAAATTTGCTAAGAAGATGCAACAGAGAACAGAATCCAGTGGATAGGTTCATATATGTTGTAGCATGGTTCATATCTACCAGACGCCGTATGACCTTTGGGGTTGCTCCTTATAATCCAATTCTTGGTGAGACACACCATGTTTCAAAGGGAAATCTTAATGTGTTAGTTGAACAGGTGTCACACCATCCTCCAGTAACAGCCCTCCATGCAACTGATGACAAGGAAAACATTGAAATGATATGGTCTCAGCAACCTGTTCCTAAATTTTATGGCACATCAGTTGAAGCTAAAGTTAATGGTAAAGGGAAACTGAAACTCTTAAATCATGGAGAAACATATGAGATGGATTCTGCTAACCTTTTATACAAAGTTTTTCCAGTTCCTAGTGTTGATTGGGTTGGTACAGTTAATCTAAGATGCTTAGAGACATGCCTAGTAGCTGAGTTATGCTTCAAATCAAGTCCTTCTTTTCTAGGACTTGGTGGAAATCATAAAGTAATTAAAGGGAAGATCTTTGACTCTTCATCTTCCAAAATTTTGTATGAACTTGATGGTCAATGGGATAGGATTGTAAAGTTGAAGGATAGAATAAATGGAGAAGTTAGAGTGATATATGACGCAACAAAAGCCAATTCATGGCTACAATCACCTATTCTCAAGAATGAAGAGGGTGTGTGGCCAACTGAATCATTACATGTTTGGAGTGATTTGACCGAAGCCATAATGAGCAAAGATTGGGAGAAAGCGAGAGAAGCAAAACAGGCCGTGGAAGAGAGACAAAGGGAGCTCATGAGAGAAAGAGAGTCAAAAAGGGGAAATTGGATTCCGAAACATTTTACTGTGTCTTACATCAAAGAAGAAGGATGGAATTGTTCACCTATTCATAATTGTGTATCAGCTTCTCCCATTATAGCCATataa 1155 0.3844 MENKEEEKVMLTKSLLQLVNELDSEEGYKIPNLVQRLLSLFKNVRLGSDITHFQMPPLFNIPKSQLQYTGESVYCSASNLLRRCNREQNPVDRFIYVVAWFISTRRRMTFGVAPYNPILGETHHVSKGNLNVLVEQVSHHPPVTALHATDDKENIEMIWSQQPVPKFYGTSVEAKVNGKGKLKLLNHGETYEMDSANLLYKVFPVPSVDWVGTVNLRCLETCLVAELCFKSSPSFLGLGGNHKVIKGKIFDSSSSKILYELDGQWDRIVKLKDRINGEVRVIYDATKANSWLQSPILKNEEGVWPTESLHVWSDLTEAIMSKDWEKAREAKQAVEERQRELMRERESKRGNWIPKHFTVSYIKEEGWNCSPIHNCVSASPIIAI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02771 384 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 5 382 IPR000648 GO:0008289
Tsu08g02771 384 Coils Coil 324 351 - -
Tsu08g02771 384 Pfam Oxysterol-binding protein 40 367 IPR000648 GO:0008289
Tsu08g02771 384 Coils Coil 1 21 - -
Tsu08g02771 384 ProSitePatterns Oxysterol-binding protein family signature. 135 145 IPR018494 -
Tsu08g02771 384 Gene3D - 119 294 - -
Tsu08g02771 384 SUPERFAMILY Oxysterol-binding protein-like 36 368 IPR037239 -
Tsu08g02771 384 Gene3D - 304 376 - -
Tsu08g02771 384 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 5 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02771 Tsu-Chr8 42641858 42654894 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02771 K22285 - gmx:100813724 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04579 04 53356459 53360283 Tsu08g02771 08 42641858 42654894 PCT