Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04579 atGGCCAAACACAGCATAATTCACTCACTATATAAACCTGATACTCTCTCACAATTTATAGAGAATTTCACATTTTCGGAAGAACCTCTGGGAAAGCAGGGAAACAACAGCGAAACAAGCAAGTCAATCTTCTTTGTTGAATCAAGACACCTAGGACCTCCAAATTGTCGAACCAGCCCTAATTTTGAATGTGTACATTCCACATCCACAGGAGTTGACTTGATAAGCAACCTCATCACTGGGAAGACATCATTGGATAGATTGATGTCAGTAGTAGAATGGAGCATTTCCACTACAAGCCCACAGAGATTTGGAGTTGCTCCCTACAATCCAATTCTTGGTGAAACTCACCATGTTTCCAAAGGAGACCTTAATGTCTTACTTGAACAGGTCGGTTCATGA 402 0.4104 MAKHSIIHSLYKPDTLSQFIENFTFSEEPLGKQGNNSETSKSIFFVESRHLGPPNCRTSPNFECVHSTSTGVDLISNLITGKTSLDRLMSVVEWSISTTSPQRFGVAPYNPILGETHHVSKGDLNVLLEQVGS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04579 133 Pfam Oxysterol-binding protein 73 131 IPR000648 GO:0008289
Tsu04g04579 133 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 62 131 IPR000648 GO:0008289
Tsu04g04579 133 SUPERFAMILY Oxysterol-binding protein-like 63 131 IPR037239 -
Tsu04g04579 133 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 62 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04579 Tsu-Chr4 53356459 53360283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04579 K22285 - gmx:100819769 98.5969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04579 04 53356459 53360283 Tsu08g02771 08 42641858 42654894 PCT