Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02761 ATGACGAattgtttttgtctttttagGTATGCCAGGTTGAGAAGGCACCTCCTTGTCGAACCACCTGTTGCAAAGAATGGAACTAATTCATCGAATCTTGAAATGGACAATCCACTTTCCCAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCAGAGCTCGAGAGATTGGTTGATCAGGATTTGTCACGTTTATACCCAGAACATGGCAGTTATTTCCAAACACCAGGATGCCAAGGCATGTTGAGACGGATTTTATTGCTATGGTGTCTCAAAAACCCAGAATGTGGTTATAGACAAGgAATGCATGAATTACTTGCTCCTCTACTTTATGTTCTCCAAGTTGATTTGGAGCGTCTCTCGGAAGTTCGGAAGCTTTATGAGGATCACTTTACAGACAGATTTGATGGTCTTTTATGTCAAGAGAATGATCTTACTTACAGCTTTGATTTTAGGAAATCTCCTGACATGATGGAGGATGAAATTGGCTCCCACGGAAATGCAATGAAAGCCAATAGTATTGACGAACTTGAACCTGAGATTCAGTCCATTGTATTACTAAGTGATGCATATGGAGCTGAAGGTGAACTCGGCATTGTCTTATCGGAGAAATTCATGGAACATGACGCATACTGTATGTTTGATGCTTTAATGAAGGGGGCTAATGGTTCAGTTGCAATGGCCGATTTCTTCTCTTCCTCTCCTGTAGCTGGCTCCCATACTGGCTTGCCTCCTGTTATCGAAGCTTCTATGGCATTGTATCACTTGTTATCTCTTGCTGATTCTTCTCTTCATAGCCATCTTTTGGATCTTGGGGTTGAACCACAGTACTTTTATCTTCGATGGCTGCGAGTTTTATTTGGACGAGAATTTTCGCTTGACAGACTATTAATCATTTGGGATGAGATCTTTGCATCAGATAACAGCAAAGTGGAAGGTAGTGCTGATGACAACATAGATTACGGGTTCAGGATCTTACATTCACCTCGCGGAGCATTTATATCGGCTATTGCTGTAGCAATGTTACTTTATTTAAGATCATCTCTACTTGCAACTGAAAACCCTACAACCTGTCTCCAAAGACTACTAAACTTCCCCGAAAACATTACCATCGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGATCTTGCTTTAAGTATTGATATTTCGTCCTCATCGCTTTTGCTTGTAGAGTCTCATTACCAAAGTAAAATGACGTCTACGAGATCCACGGTCCTTCCATCTGAGTCCGTGTCTCCAAAAACTCCTCTGAATTTCGTACCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCTCAAAAGGCCGAAGAACGTAAGAAAGATGTTGTAGAAAATCAGGTTCCAACTCGGAAGAAAGGATGGACAGAAAAGATGAAATTACGTTTGAGAAGAACGGAATCTGACCCGCCTCCATCAAGGATTCTAAGTGGACAAAGGGGATCTAAGCCATCGTTTAGGCGCAGTTTGCTAGAAGATCTGCGTAAAGCACTTGGCGCTGAGGAAAACACAGAACATGAGCAGCGTCATGATGAAATCTTAAGCGAGCAGGATAATATTTCTGAAGCAGTTGAAATAGAGCAACAAGATAGTGGCTGTAACAGTGACAACAATTCTGATGATAAATGTCCAAGTGGAAATTCTGGACATGAGGAAGATTCGTCTATCTATTCCGACTCCACTAGTCCTCCTAATGAGGCCAATGATCATGAAATTGCCTCAGAAAAAAATAGTGCTACATCTTATTTATCCCTTGATGAATGTAATGAAATTTTAGACACTAGTCCTATTGATCCACCCCTTCCAATCTCTGATCTACCTGTGAATGTGCCTCCGACGTCAGTGAGCAATAATGATGATCAAGGAAATAATCAGTGCAATGAAACTTCAGATACCAGTCCCAGTGATTCACCCTTACCATTGCCAATCTCTGATCCTTCTCAGAACTTACCTCAGACATCAGGGTGCAATAATGACGATGAAGGAAGTTCAGCCACACAACCTAAAGAGAGAAAACAGAATAAATTCCAGTGGTTTTGGAAGTTTGGACGGAACACCGTTGAGGCTATCTCCGAGAAAGTAGGAGGTGGTCCTGCCGAGGCTACGAAGTCTGCCAACAGTATTAGTAATCAAAGTAATTCATCGCCGCCAGCCTCACCTGCTGCTAATGGACATTGTAGTTCTGTTAGTTGCAGAGGAGAATCTGTAGACCAAAATATGATGGGAACTTTGAAGAACATTGGGCAGTCTATGCTTGACCATATTCAGGTGATTGAATCTGTTTTCCAGCAAGATCGGGGCCAGGGAGCCTCATCGGATAATTTATCTAAGAATGTTCTTGTTGGGAAAGGGCAGGTAACTGCCATGACAGCTCTCAAGGAGCTTCGGAAAATCAGCAATCTTTTGTCTGAGATGTGA 2445 0.4184 MTNCFCLFRYARLRRHLLVEPPVAKNGTNSSNLEMDNPLSQNPDSTWSRFFRNAELERLVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLKNPECGYRQGMHELLAPLLYVLQVDLERLSEVRKLYEDHFTDRFDGLLCQENDLTYSFDFRKSPDMMEDEIGSHGNAMKANSIDELEPEIQSIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMKGANGSVAMADFFSSSPVAGSHTGLPPVIEASMALYHLLSLADSSLHSHLLDLGVEPQYFYLRWLRVLFGREFSLDRLLIIWDEIFASDNSKVEGSADDNIDYGFRILHSPRGAFISAIAVAMLLYLRSSLLATENPTTCLQRLLNFPENITIEKLLEKAKSLQDLALSIDISSSSLLLVESHYQSKMTSTRSTVLPSESVSPKTPLNFVPDSYWEEKWRVAQKAEERKKDVVENQVPTRKKGWTEKMKLRLRRTESDPPPSRILSGQRGSKPSFRRSLLEDLRKALGAEENTEHEQRHDEILSEQDNISEAVEIEQQDSGCNSDNNSDDKCPSGNSGHEEDSSIYSDSTSPPNEANDHEIASEKNSATSYLSLDECNEILDTSPIDPPLPISDLPVNVPPTSVSNNDDQGNNQCNETSDTSPSDSPLPLPISDPSQNLPQTSGCNNDDEGSSATQPKERKQNKFQWFWKFGRNTVEAISEKVGGGPAEATKSANSISNQSNSSPPASPAANGHCSSVSCRGESVDQNMMGTLKNIGQSMLDHIQVIESVFQQDRGQGASSDNLSKNVLVGKGQVTAMTALKELRKISNLLSEM 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02761 814 MobiDBLite consensus disorder prediction 711 739 - -
Tsu08g02761 814 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 40 225 - -
Tsu08g02761 814 Gene3D - 248 390 - -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 447 496 - -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 536 682 - -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 655 682 - -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 618 647 - -
Tsu08g02761 814 Pfam Rab-GTPase-TBC domain 208 309 IPR000195 -
Tsu08g02761 814 Pfam Rab-GTPase-TBC domain 56 116 IPR000195 -
Tsu08g02761 814 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 9 745 - -
Tsu08g02761 814 ProSiteProfiles TBC/rab GAP domain profile. 37 309 IPR000195 -
Tsu08g02761 814 SMART tbc_4 3 355 IPR000195 -
Tsu08g02761 814 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 9 745 - -
Tsu08g02761 814 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 43 269 IPR035969 -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 703 739 - -
Tsu08g02761 814 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 245 384 IPR035969 -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 447 478 - -
Tsu08g02761 814 MobiDBLite consensus disorder prediction 536 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02761 Tsu-Chr8 42375674 42380068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02761 K18469 - gmx:100812967 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04575 04 53327171 53332068 Tsu08g02761 08 42375674 42380068 PCT