Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02759 ATGGGAACATTTACAAGCTTTAGAAAAGCCTATGGAGCTCTCAAGGACTCCACCAAGGTTGGCCTTGCCAAAGTCAATAGTGAATACAAGgaGTTGGATATTGCCATTGTGAAAGCTACCAATCATGTTGAATATCCTCCAAAGGAACGTCATGTTAGAAAAATTTTCTATGCGACATCAGCACACCAACCACGCGCGGATGTggcatactgcattcataaacTATCCAAGAGACTTGCAAAGACACGAAGTTGGATAGTTGCTATAAAGACATTGATAGTGATTCATAGGACTTTAAGAGAAGGCGATCCTACATTCCGAGAAGAGCTTGCGAACTATGCACGCAGAGGACATATTTTCCAAATATCTAATTTCAAAGATGACTCAAGCCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTACGCACTATTTTTAGAAGAAAGACTTGAATGTTTTAGAGTCCTTAAATATGACATTGAATCGGAGCGTTTAGTAAAATCATCGCCAGCTGCAACTAAAGCACATAGTAGAACTCGATCGTTGGCTAATGACGATCTGTTGGAGCAACTACCTGCTTTGCAACAACTTTTATTTCGTCTTATTGCTTGTCAGCCGGAGGGATGTGCTTATACCAATTATCTAGTACAATATGCATTAGCTTTGGTGTTGAAAGAGAGCTTCAAAATATATTGTGCACTCAATGATGGAATCATCAATCTTGTGGACATGTTTTTTGAAACTTCAAGACATGAAGCAGTGAAGGCTTTAAATGTATATAAACGAGCCGGCCAACAGGCTGAAAATCTTGCTGAATTTTATGAATACTGCAAAGGCTTGGACCTTGCTAAGAATTTTCAGTTTCCAACCCTAAGACAGCCACCTCCATCTTTTCTTGCCACAATGGAAGAATATATCAAAGAAGCACCTCAATCAGGATCTATGAATAAGAGATTGGAGTATGAGCAACATGATGAATCTCCGGAAGAAGAACCGGAGCCAAAAGAACCCGAAGAGCCACAAGAAACCGAGAAACAAGAAGAGGAAGTCAATGAGGAAGAAAAAACACAAGAGGAAGAAACAAAATCTAGTGAAGAGGAAGTTGAGCCTCCTCCACTGATACCAACTGACGGCAACGATGACTTACTGGGTCTGAGTGAATTACATCCTAGAGCCATAGAATTGGAGGAAAACAATGCCATGGCTCTTGCAATCATACCGCCCGGTGgaaataataataattcaaacaaTCTTGCTTTAAGTAATATTGGTGGAACTACCGGTTGGGAACTAGCTTTGGTTACGACACCAAGTAACCATACCAGTCAAGCACCGGATCGCAGAATGGCCGGTGGTTTTGACAAGCTATTACTAGACAGCCTATACGAAGACGAAAGCGCAAGAAGACAACTTCAACTTCAAAATGCAGGTTATGGACATGAAGAAATAACTGTACAAAATCCATTTGATCAATATAATCAACATGATCCATTTGCAATGTCTAAGAACATAGCACCTCCAACAAATGTTCAATTAGCATTGttgaatcaacaacaacagcaacatcaaatgatgttccaacaacaacagcaacaacaacaaatgatgtatccaaatcaacaacaacaaaattataacaTGGCTATGGTTCCTCATCAGCAACAACCTAATGCTCAACAATTGCAAATTATGGGAAATCATAATCCATTTGGTGATCCTTTACCTGTGGCTAGTTATCCTCATAACTCCTTGCCTCAGAATGGAAATTACAATTTAATGTAG 1785 0.3737 MGTFTSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLAKTRSWIVAIKTLIVIHRTLREGDPTFREELANYARRGHIFQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRVLKYDIESERLVKSSPAATKAHSRTRSLANDDLLEQLPALQQLLFRLIACQPEGCAYTNYLVQYALALVLKESFKIYCALNDGIINLVDMFFETSRHEAVKALNVYKRAGQQAENLAEFYEYCKGLDLAKNFQFPTLRQPPPSFLATMEEYIKEAPQSGSMNKRLEYEQHDESPEEEPEPKEPEEPQETEKQEEEVNEEEKTQEEETKSSEEEVEPPPLIPTDGNDDLLGLSELHPRAIELEENNAMALAIIPPGGNNNNSNNLALSNIGGTTGWELALVTTPSNHTSQAPDRRMAGGFDKLLLDSLYEDESARRQLQLQNAGYGHEEITVQNPFDQYNQHDPFAMSKNIAPPTNVQLALLNQQQQQHQMMFQQQQQQQQMMYPNQQQQNYNMAMVPHQQQPNAQQLQIMGNHNPFGDPLPVASYPHNSLPQNGNYNLM 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02759 594 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Tsu08g02759 594 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Tsu08g02759 594 SUPERFAMILY GAT-like domain 178 309 - -
Tsu08g02759 594 Coils Coil 344 368 - -
Tsu08g02759 594 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 576 IPR045192 GO:0048268|GO:0072583
Tsu08g02759 594 MobiDBLite consensus disorder prediction 310 385 - -
Tsu08g02759 594 Gene3D - 5 161 IPR008942 -
Tsu08g02759 594 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 576 - -
Tsu08g02759 594 SMART enth_2 30 161 IPR013809 -
Tsu08g02759 594 MobiDBLite consensus disorder prediction 332 356 - -
Tsu08g02759 594 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Tsu08g02759 594 Gene3D ANTH domain 173 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tsu08g02759 594 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02759 Tsu-Chr8 42326423 42330936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02759 K20044 - gmx:100783084 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04574 04 53322896 53326721 Tsu08g02759 08 42326423 42330936 PCT