Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02716 ATGTGGTTTTCGTTCTGGAGATCCAAAGATCGTTTTTCCTTGGATCAACTCAGGTACTTAGCTGACCAGTTGACAAAAGTTCAAATAGTTAATGATGTTAATAAGGATTTTGTTATTGAGGCACTGAGATCAATCGCAGAGTTGATAACATATGGTGACCAACATGATCCAAGCTTTTTTGAATTTTTCATGGAAAAGCAAGTTGTGGGGGATTTTGTACGTATTCTAAAACTTAGCAGGACTATTAGCATTCCACTTCAGTTACTACAAACTGTTAGCATTATGATCCAAAACCTACAGAGTGAACATGCTATATACTATATGTTTAGTAATGAACATATGAACTACCTAATTACATATTCATTTGATTTCCGCAATGATGAGCTGTTGTCATACTACATATCTTTTTTAAGAGCAATAGGTGGGAAATTGAACAAGAATACTATTTCTCTGCTTGTGAAGACTCGCAATGACGAAGTAGTTTCATTTCCACTATATGTTGAAGCAATACGCTTTGCTTTTCATGAGGAGAACATGATTCGCGCCGCTGTACGTGCTGTAACCCTTAATGTTTATCATGTTGGAGATGACTCTGTTAATAGATATATAACTAGCGCACCTCACACAGATTACTTCTCAAATCTGGTTTCCTTTTTCAAGAAGCAGTGTATGGATTTAAACAAACTGATCTCTGAGACACTGAAAAATCCAGGCCCAGATTCAAACTCTACCATTACTGCTGCTGTAGATGAAATTGAGGATAATCTATATTACTTCAGTGATGTGATCTCCGCCGGAATTCCTGATGTTGAAAGGTTAATAACAGATAGCCTTCTGACGCTTCTGATCTTTCCATTACTTCTTCCTTCCCTGAAGATAGTGGCTGTTAATGATATGCAAAGTGATGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTGAGGATAGTCAAGATCAAAGATTTGGCAAATACAATAGTTGCTGCACTTTATTACCCCTTAGAGTCCTTTACAAAATGTTCCGAGGGTCAAGTCAACGGCTATATACCTGATCATGGTTTTAAATCTGAAAGCGATGGGATAGATAACGATAATCTTCCcaagaataataaaaaacggTTGGTGGTCCATGTGCCATGCTCATCTAGGTCTTCAGATTTTCATCCACAAAGTATAACCATGCTAAATAATGGTAGCAGTTTGAATGCGTCTTTGAGGGAAGTTTTGCTTAAATATGTAACCGATGGGGCTGATGTACAAGTTTTGGGTTCCTTGAGTGTGCTTGCCACTCTGCTGCGAACTAAAGAACTTGATGAGTCAATGCTAGATGGGCTTGGAATTCTTCCTCAAcgcaaacaacaaaaaaagctCCTATTGCAAGCTTTGGTTGGCTCGGCTTCAGGGGAAGAACAACTTTTTTCTTCTGAAAGTAGCTTGACAAGAGATGGCATTGCATGTGAGCTTGATGTTTATCTTGAAAGGATCAAGGAGCAGTATGGGGTATCTTTTCAGTCTCCAAATTTTATATCAAGCCCTCGTGTACCTAGATTTCAGGTGCTTGATGCATTAGTGAGCCTCCTTTGTCGTTCTAATATATCTGCAGAGACACTATGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCCTACAGTCAGTCAGAGTTCAACAAGCACCACCTCAAATTGCTGAAAATTTCATATGAGAATTCTGCTTGTGCTCTTGAAAAGGAAGTTAAAGGTTTCTGGCCTGACCTTCTTATTACTGTTCTCTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGAATCCTCATCCCCTCCAAAAGAACCAAAATCCATGCTTTTTCCACCTCGGAAGCTCTTTTCAGAAGAAGATATACCTGAGGGATCATCATTTACTGCTGGAGAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTTCTGCACCAACTTCAAATATTCACTCACGGTAGAGCTTTGCCTGATCAACCTCTTATTTATCAACCTACTGATCATCGTACGAATTCTCGAGCCCAGACTTCTGGACTTGTGTCAATCCCAAAGCCAGGCACTGAAATGAACCTTGGTAATGCTGTGCCTTGTCGAATTGCTTTCGAGAGGGGAAAAGAGCGTCATTTTTGGTTTCTAGCAATCTCTATAGGAACATCTGGTTGGCTTGTACTTGCAGAAGAATTGCCTCTGAAGAAGCCCTATGGAGTTGTTCGGGTTGCTGCACCTTTGGCTGGGTGCAATCCCAGGATTGATGATAAGCATTCAAAGTGGTTACACCTGCGGATCCGACCTTCTGCTTTACCTTTTCTGGATCCTGTCAAGTACAAACCGCATGGGAAATTAAAGACAAAAGCTTTTGTTGATGGAAGATGGATATTGGCGTTCAGGGACGAGGAGTCTTGCAAAACTGCTTTTCTCATGATTCTTGAAGAGATTAACTATCTATGTGACGAGGTTCATAGAAGAATAAAACCTTCGCTCAAGCTTGCAACCGCATTAGACATATCAAACCTGTCTGCTCCTGTTTCAGAGGAATCCTCTTCACATACTACACCTCCCGATTCGTTGTAA 2583 0.398 MWFSFWRSKDRFSLDQLRYLADQLTKVQIVNDVNKDFVIEALRSIAELITYGDQHDPSFFEFFMEKQVVGDFVRILKLSRTISIPLQLLQTVSIMIQNLQSEHAIYYMFSNEHMNYLITYSFDFRNDELLSYYISFLRAIGGKLNKNTISLLVKTRNDEVVSFPLYVEAIRFAFHEENMIRAAVRAVTLNVYHVGDDSVNRYITSAPHTDYFSNLVSFFKKQCMDLNKLISETLKNPGPDSNSTITAAVDEIEDNLYYFSDVISAGIPDVERLITDSLLTLLIFPLLLPSLKIVAVNDMQSDVVTSLYLLCCILRIVKIKDLANTIVAALYYPLESFTKCSEGQVNGYIPDHGFKSESDGIDNDNLPKNNKKRLVVHVPCSSRSSDFHPQSITMLNNGSSLNASLREVLLKYVTDGADVQVLGSLSVLATLLRTKELDESMLDGLGILPQRKQQKKLLLQALVGSASGEEQLFSSESSLTRDGIACELDVYLERIKEQYGVSFQSPNFISSPRVPRFQVLDALVSLLCRSNISAETLWDGGWLLRQLLPYSQSEFNKHHLKLLKISYENSACALEKEVKGFWPDLLITVLCDEWRKCKRAMESSSPPKEPKSMLFPPRKLFSEEDIPEGSSFTAGERMHELVKVFVLLHQLQIFTHGRALPDQPLIYQPTDHRTNSRAQTSGLVSIPKPGTEMNLGNAVPCRIAFERGKERHFWFLAISIGTSGWLVLAEELPLKKPYGVVRVAAPLAGCNPRIDDKHSKWLHLRIRPSALPFLDPVKYKPHGKLKTKAFVDGRWILAFRDEESCKTAFLMILEEINYLCDEVHRRIKPSLKLATALDISNLSAPVSEESSSHTTPPDSL 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02716 860 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Tsu08g02716 860 PANTHER PROTEIN TRANSPARENT TESTA 9 1 844 - -
Tsu08g02716 860 PANTHER UNCHARACTERIZED 1 844 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02716 Tsu-Chr8 41558858 41574513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02716 K19513 - gmx:100786267 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04563 04 53242887 53251990 Tsu08g02716 08 41558858 41574513 PCT