Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02657 atgatcAATATGGATGAAGCAGGTTCAGTTTCAATTTCAGCATATGATGTTATGACAAGTTGGTTTACACCCTCTTGTATATTCTTATTTGTCAACCTTGTCATTGGTACCATAGCTATTACCACTCGTTTCGCCGCTCAGCGAAAAGGGGACTCGCCACCACAACTTGTCCGTTCCACGTCATTTTTTGGACGAGTCACGTCCTTTGGTCATGGTTGCTGTAAATACAAACCAATAatagcagcagcaacaacaacaacaccggAAGAAACCCATATAGAACCAGTTGACAACTGTGATGTGCCCCAGCTCGATCGGGCCATATCATCTACCATGTTGGACCGAGTCAAGTCAATTGACCTGGGCCTTTCTAAAACAGAAATTAATAAAGGCTCAGATGACTTGACCAAAAATCCTCTGCCTAGAGCTCCGTCGCTCTTGGAACGGTTGATGTCAAGGAATTTTCGTCGATTGGATTCGGTAAAGGAGGAGAAGAAACCAGAATCCGAAGTGGAACTCGAATCGAATAGGGAGATTTTGAGAGGGAGGGCAGAAGAGGAAGAAGTGGATGCAAAGGCTGATGATTTTATAAAAAGGTTTAAGCAACAACTAAGAATGGAAAGGCTTGATTCCATTCTACGTTATAGGGATATACTTAATAGACACTGA 669 0.4036 MINMDEAGSVSISAYDVMTSWFTPSCIFLFVNLVIGTIAITTRFAAQRKGDSPPQLVRSTSFFGRVTSFGHGCCKYKPIIAAATTTTPEETHIEPVDNCDVPQLDRAISSTMLDRVKSIDLGLSKTEINKGSDDLTKNPLPRAPSLLERLMSRNFRRLDSVKEEKKPESEVELESNREILRGRAEEEEVDAKADDFIKRFKQQLRMERLDSILRYRDILNRH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02657 222 Pfam Cotton fibre expressed protein 186 221 IPR008480 -
Tsu08g02657 222 PANTHER DUF4408 DOMAIN PROTEIN 13 86 - -
Tsu08g02657 222 Pfam Domain of unknown function (DUF4408) 13 44 IPR025520 -
Tsu08g02657 222 PANTHER DUF4408 DOMAIN PROTEIN 163 221 - -
Tsu08g02657 222 PANTHER COTTON FIBER (DUF761) 163 221 - -
Tsu08g02657 222 PANTHER COTTON FIBER (DUF761) 13 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02657 Tsu-Chr8 40198589 40199340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02657 - - mtr:MTR_2g039320 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04532 04 52992351 52993708 Tsu08g02657 08 40198589 40199340 PCT